RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 LRRC63Q05C16 580 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 SEPT2Q15019 361 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 TADA2BQ86TJ2 420 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 GANCQ8TET4 914 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 PTPRTO14522 1441 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 DNAJC6O75061 913 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 PAMP19021 973 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 CCNA1P78396 465 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 NKX1-1Q15270 411 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-208ENST00000599343 ACAD11Q709F0 780 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 ARMCX2Q7L311 632 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 RHOT2Q8IXI1 618 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 KIFC3Q9BVG8 833 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 CNOT8Q9UFF9 292 aaKnown RBP12.66□□□□□ -0.38
SCN8A-208ENST00000599343 ATP6V1E1P36543 226 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
SCN8A-208ENST00000599343 CUL4AQ13619 759 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 VPS39Q96JC1 886 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 DACH2Q96NX9 599 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 MYO1CO00159 1063 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 PODXLO00592 558 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 MAGEA9P43362 315 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 ZNF211Q13398 564 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-208ENST00000599343 TTLL11Q8NHH1 800 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 TTC25Q96NG3 672 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 GPR108Q9NPR9 543 aa12.66□□□□□ -0.38
SCN8A-208ENST00000599343 hCG_1984214I3L0E3 225 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 FSCBQ5H9T9 825 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 THNSL1Q8IYQ7 743 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 ZNF713Q8N859 430 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-208ENST00000599343 SERPINB13Q9UIV8 391 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 MOSPD1Q9UJG1 213 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 ASAP1Q9ULH1 1129 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 LEMD3Q9Y2U8 911 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 MAST1Q9Y2H9 1570 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 hCG_2014768A0A024R1R8 64 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 IFNAR1P17181 557 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 HLA-DPA1P20036 260 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 ZC3H12BQ5HYM0 836 aaKnown RBP12.65□□□□□ -0.38
SCN8A-208ENST00000599343 NR1H4Q96RI1 486 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-208ENST00000599343 ECT2Q9H8V3 914 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 ADAM22Q9P0K1 906 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 MLH3Q9UHC1 1453 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 ABCC10Q5T3U5 1492 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 PDCD6IPQ8WUM4 868 aaKnown RBP12.65□□□□□ -0.38
SCN8A-208ENST00000599343 GJB4Q9NTQ9 266 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 MYCP01106 439 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-208ENST00000599343 COPS2P61201 443 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 DEUP1Q05D60 604 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 TBCCQ15814 346 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 CCNYL1Q8N7R7 359 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 MARCH10Q8NA82 808 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-208ENST00000599343 COG4Q9H9E3 785 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 ABHD10Q9NUJ1 306 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 STRIP2Q9ULQ0 834 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 SNX5Q9Y5X3 404 aa12.65□□□□□ -0.38
SCN8A-208ENST00000599343 TMEM247A6NEH6 219 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 LRRC53A6NM62 1247 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 K7ERI5 159 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 HAUS5O94927 633 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 PAPOLAP51003 745 aaKnown RBP12.65□□□□□ -0.39
SCN8A-208ENST00000599343 PMS2P54278 862 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 LRRC14Q15048 493 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 RESP18Q5W5W9 173 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 MMS22LQ6ZRQ5 1243 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 FAM161BQ96MY7 647 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 SARS2Q9NP81 518 aaKnown RBP12.65□□□□□ -0.39
SCN8A-208ENST00000599343 ADA2Q9NZK5 511 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 KIF17Q9P2E2 1029 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 ADAM21Q9UKJ8 722 aa12.65□□□□□ -0.39
SCN8A-208ENST00000599343 ESYT3A0FGR9 886 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 CCDC188H7C350 402 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 DIAPH2O60879 1101 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 TERF2Q15554 542 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 IMPG1Q17R60 797 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 FSD1LQ9BXM9 530 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 FAM49AQ9H0Q0 323 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-208ENST00000599343 CYP4F11Q9HBI6 524 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 LOC102724428A0A0B4J2F2 783 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 PLEKHG3A1L390 1219 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 MAN1A2O60476 641 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 SIK1P57059 783 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 POU5F1BQ06416 359 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 PRPF38AQ8NAV1 312 aaKnown RBP12.64□□□□□ -0.39
SCN8A-208ENST00000599343 BTBD6Q96KE9 485 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 MMTAG2Q9BU76 263 aaKnown RBP12.64□□□□□ -0.39
SCN8A-208ENST00000599343 POLD4Q9HCU8 107 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 ITM2BQ9Y287 266 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 CREB3O43889 395 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 RNF25Q96BH1 459 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-208ENST00000599343 PIH1D3Q9NQM4 214 aaKnown RBP12.64□□□□□ -0.39
SCN8A-208ENST00000599343 SURF1Q15526 300 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 NFRKBQ6P4R8 1299 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 BZW1Q7L1Q6 419 aaKnown RBP12.64□□□□□ -0.39
SCN8A-208ENST00000599343 RASSF3Q86WH2 238 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 CDHR1Q96JP9 859 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 GPR101Q96P66 508 aaPredicted RBP12.64□□□□□ -0.39
SCN8A-208ENST00000599343 OSBPL3Q9H4L5 887 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 DIS3Q9Y2L1 958 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms