RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 WNT7AO00755 349 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 UPP2O95045 317 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 IGFBP4P22692 258 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 KIZQ2M2Z5 673 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 NCAPH2Q6IBW4 605 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 ANO5Q75V66 913 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 C4orf19Q8IY42 314 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 TMX3Q96JJ7 454 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 SAMD11Q96NU1 681 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 MTMR9Q96QG7 549 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 OSMRQ99650 979 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 JPH2Q9BR39 696 aaPredicted RBP18.69■□□□□ 0.58
USHBP1-208ENST00000598309 LXNQ9BS40 222 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 TMX1Q9H3N1 280 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 CDHR5Q9HBB8 845 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 RC3H2Q9HBD1 1191 aaKnown RBP18.69■□□□□ 0.58
USHBP1-208ENST00000598309 PCDHA12Q9UN75 941 aa18.69■□□□□ 0.58
USHBP1-208ENST00000598309 NOC2LQ9Y3T9 749 aaKnown RBP18.69■□□□□ 0.58
USHBP1-208ENST00000598309 DDX11L8A8MPP1 907 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 GPR182O15218 404 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 GTPBP6O43824 516 aaPredicted RBP18.68■□□□□ 0.58
USHBP1-208ENST00000598309 TRAPPC10P48553 1259 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 NLRP11P59045 1033 aaKnown RBP18.68■□□□□ 0.58
USHBP1-208ENST00000598309 CDC42EP1Q00587 391 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 NFX1Q12986 1120 aaKnown RBP18.68■□□□□ 0.58
USHBP1-208ENST00000598309 TMEM266Q2M3C6 531 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 SPRED2Q7Z698 418 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 NPAS4Q8IUM7 802 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 NOSTRINQ8IVI9 506 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.68■□□□□ 0.58
USHBP1-208ENST00000598309 NEK9Q8TD19 979 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 ADAMTS10Q9H324 1103 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 ZSWIM4Q9H7M6 989 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 SUGCTQ9HAC7 445 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 CYP26B1Q9NR63 512 aa18.68■□□□□ 0.58
USHBP1-208ENST00000598309 TTC3P53804 2025 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 TMEM150BA6NC51 233 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 MAFO75444 373 aaPredicted RBP18.67■□□□□ 0.58
USHBP1-208ENST00000598309 DNM2P50570 870 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 GPC3P51654 580 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 RTN4RL1Q86UN2 441 aaPredicted RBP18.67■□□□□ 0.58
USHBP1-208ENST00000598309 FAM228AQ86W67 206 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 EXOC8Q8IYI6 725 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 CRIPAKQ8N1N5 446 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 PPP1R16BQ96T49 567 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 TTC12Q9H892 705 aaPredicted RBP18.67■□□□□ 0.58
USHBP1-208ENST00000598309 C1orf112Q9NSG2 853 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 RNF216Q9NWF9 866 aaPredicted RBP18.67■□□□□ 0.58
USHBP1-208ENST00000598309 WRAP73Q9P2S5 460 aaPredicted RBP18.67■□□□□ 0.58
USHBP1-208ENST00000598309 ST3GAL5Q9UNP4 418 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 EVPLQ92817 2033 aa18.67■□□□□ 0.58
USHBP1-208ENST00000598309 RFXAPO00287 272 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 LPXNO60711 386 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 CD2BP2O95400 341 aaKnown RBP18.66■□□□□ 0.58
USHBP1-208ENST00000598309 STAG3L1P0CL83 205 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 EIF4BP23588 611 aaKnown RBP18.66■□□□□ 0.58
USHBP1-208ENST00000598309 YWHABP31946 246 aaKnown RBP18.66■□□□□ 0.58
USHBP1-208ENST00000598309 MCM7P33993 719 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 GRB10Q13322 594 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 GNL2Q13823 731 aaKnown RBP18.66■□□□□ 0.58
USHBP1-208ENST00000598309 PLA2G4FQ68DD2 849 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 RGL1Q9NZL6 768 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 LMCD1Q9NZU5 365 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 MTCH2Q9Y6C9 303 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 ADGRA3Q8IWK6 1321 aa18.66■□□□□ 0.58
USHBP1-208ENST00000598309 DGKIO75912 1065 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 LYPLA2O95372 231 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 U2AF2P26368 475 aaKnown RBP eCLIP18.65■□□□□ 0.58
USHBP1-208ENST00000598309 RFC5P40937 340 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 TXKP42681 527 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 SARSP49591 514 aaKnown RBP18.65■□□□□ 0.58
USHBP1-208ENST00000598309 DRP2Q13474 957 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 OTUD6AQ7L8S5 288 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 SLC7A3Q8WY07 619 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 ZNF689Q96CS4 500 aaPredicted RBP18.65■□□□□ 0.58
USHBP1-208ENST00000598309 DYDC2Q96IM9 177 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 CEP170P1Q96L14 293 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 HSD17B14Q9BPX1 270 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 EIF2AK1Q9BQI3 630 aaKnown RBP18.65■□□□□ 0.58
USHBP1-208ENST00000598309 C17orf80Q9BSJ5 609 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 TMEM60Q9H2L4 133 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 DHX33Q9H6R0 707 aaKnown RBP18.65■□□□□ 0.58
USHBP1-208ENST00000598309 RGS18Q9NS28 235 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 MTUS1Q9ULD2 1270 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 NOL7Q9UMY1 257 aaKnown RBP18.65■□□□□ 0.58
USHBP1-208ENST00000598309 RWDD3Q9Y3V2 267 aa18.65■□□□□ 0.58
USHBP1-208ENST00000598309 LOXHD1Q8IVV2 1947 aa18.64■□□□□ 0.58
USHBP1-208ENST00000598309 COL4A4P53420 1690 aaPredicted RBP18.64■□□□□ 0.57
USHBP1-208ENST00000598309 DENND3A2RUS2 1198 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 GAS2O43903 313 aaKnown RBP18.64■□□□□ 0.57
USHBP1-208ENST00000598309 MGEA5O60502 916 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 SLITRK3O94933 977 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 DARSP14868 501 aaKnown RBP18.64■□□□□ 0.57
USHBP1-208ENST00000598309 ATP2B1P20020 1258 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 NPEPPSP55786 919 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 CYP4A11Q02928 519 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 CTTNQ14247 550 aaKnown RBP18.64■□□□□ 0.57
USHBP1-208ENST00000598309 TTC38Q5R3I4 469 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 ZNF410Q86VK4 478 aa18.64■□□□□ 0.57
USHBP1-208ENST00000598309 FIBCD1Q8N539 461 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms