RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 FAM117BQ6P1L5 589 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 MYOCDQ8IZQ8 938 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 USP38Q8NB14 1042 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 ADAMTS10Q9H324 1103 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 SLC28A3Q9HAS3 691 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 CYP26B1Q9NR63 512 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 PADI3Q9ULW8 664 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 AKT3Q9Y243 479 aa25.55■■□□□ 1.68
IRF3-220ENST00000598108 ENPP3O14638 875 aa25.54■■□□□ 1.68
IRF3-220ENST00000598108 TLL1O43897 1013 aa25.54■■□□□ 1.68
IRF3-220ENST00000598108 DKC1O60832 514 aaKnown RBP eCLIP25.54■■□□□ 1.68
IRF3-220ENST00000598108 GJB5O95377 273 aa25.54■■□□□ 1.68
IRF3-220ENST00000598108 AMHP03971 560 aa25.54■■□□□ 1.68
IRF3-220ENST00000598108 TMOD1P28289 359 aa25.54■■□□□ 1.68
IRF3-220ENST00000598108 RTN4RL1Q86UN2 441 aaPredicted RBP25.54■■□□□ 1.68
IRF3-220ENST00000598108 ZNF668Q96K58 619 aaPredicted RBP25.54■■□□□ 1.68
IRF3-220ENST00000598108 OSMRQ99650 979 aa25.54■■□□□ 1.68
IRF3-220ENST00000598108 ZBED2Q9BTP6 218 aa25.54■■□□□ 1.68
IRF3-220ENST00000598108 NOC2LQ9Y3T9 749 aaKnown RBP25.54■■□□□ 1.68
IRF3-220ENST00000598108 MYH9P35579 1960 aaKnown RBP25.54■■□□□ 1.68
IRF3-220ENST00000598108 CDH23Q9H251 3354 aa25.53■■□□□ 1.68
IRF3-220ENST00000598108 A0A087WWV3 80 aa25.53■■□□□ 1.68
IRF3-220ENST00000598108 LCHNA4D1U4 455 aa25.53■■□□□ 1.68
IRF3-220ENST00000598108 K7ELQ4 463 aaPredicted RBP25.53■■□□□ 1.68
IRF3-220ENST00000598108 MAFO75444 373 aaPredicted RBP25.53■■□□□ 1.68
IRF3-220ENST00000598108 YWHABP31946 246 aaKnown RBP25.53■■□□□ 1.68
IRF3-220ENST00000598108 CRYBB1P53674 252 aaPredicted RBP25.53■■□□□ 1.68
IRF3-220ENST00000598108 NLRP11P59045 1033 aaKnown RBP25.53■■□□□ 1.68
IRF3-220ENST00000598108 PTGDRQ13258 359 aa25.53■■□□□ 1.68
IRF3-220ENST00000598108 LINC01599Q8WXQ3 324 aa25.53■■□□□ 1.68
IRF3-220ENST00000598108 CEP170P1Q96L14 293 aa25.53■■□□□ 1.68
IRF3-220ENST00000598108 MAP7D2Q96T17 732 aa25.53■■□□□ 1.68
IRF3-220ENST00000598108 TMX1Q9H3N1 280 aa25.53■■□□□ 1.68
IRF3-220ENST00000598108 LYPLA2O95372 231 aa25.52■■□□□ 1.68
IRF3-220ENST00000598108 SPATA31C1P0DKV0 1188 aa25.52■■□□□ 1.68
IRF3-220ENST00000598108 PAK2Q13177 524 aa25.52■■□□□ 1.68
IRF3-220ENST00000598108 TOP1MTQ969P6 601 aa25.52■■□□□ 1.68
IRF3-220ENST00000598108 SNX21Q969T3 373 aa25.52■■□□□ 1.68
IRF3-220ENST00000598108 RAD9AQ99638 391 aa25.52■■□□□ 1.68
IRF3-220ENST00000598108 ERVK-5Q9HDB9 667 aa25.52■■□□□ 1.68
IRF3-220ENST00000598108 FOXD4L1Q9NU39 408 aa25.52■■□□□ 1.68
IRF3-220ENST00000598108 UPP2O95045 317 aa25.51■■□□□ 1.67
IRF3-220ENST00000598108 NFX1Q12986 1120 aaKnown RBP25.51■■□□□ 1.67
IRF3-220ENST00000598108 PPP2R2DQ66LE6 453 aa25.51■■□□□ 1.67
IRF3-220ENST00000598108 NEK9Q8TD19 979 aa25.51■■□□□ 1.67
IRF3-220ENST00000598108 MYLIPQ8WY64 445 aa25.51■■□□□ 1.67
IRF3-220ENST00000598108 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.51■■□□□ 1.67
IRF3-220ENST00000598108 ST3GAL5Q9UNP4 418 aa25.51■■□□□ 1.67
IRF3-220ENST00000598108 RPS6KA5O75582 802 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 GPC3P51654 580 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 TAP1Q03518 808 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 XKR9Q5GH70 373 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 OTUD6AQ7L8S5 288 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 SPRED2Q7Z698 418 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 CATSPER3Q86XQ3 398 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 INTS4Q96HW7 963 aaKnown RBP25.5■■□□□ 1.67
IRF3-220ENST00000598108 DHX33Q9H6R0 707 aaKnown RBP25.5■■□□□ 1.67
IRF3-220ENST00000598108 CHD7Q9P2D1 2997 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 SUCLA2Q9P2R7 463 aaPredicted RBP25.5■■□□□ 1.67
IRF3-220ENST00000598108 STXBP5LQ9Y2K9 1186 aa25.5■■□□□ 1.67
IRF3-220ENST00000598108 MGEA5O60502 916 aa25.49■■□□□ 1.67
IRF3-220ENST00000598108 MED24O75448 989 aa25.49■■□□□ 1.67
IRF3-220ENST00000598108 IL17AQ16552 155 aa25.49■■□□□ 1.67
IRF3-220ENST00000598108 RILPL1Q5EBL4 403 aa25.49■■□□□ 1.67
IRF3-220ENST00000598108 FAM228AQ86W67 206 aa25.49■■□□□ 1.67
IRF3-220ENST00000598108 PRDM12Q9H4Q4 367 aa25.49■■□□□ 1.67
IRF3-220ENST00000598108 WDR81Q562E7 1941 aa25.49■■□□□ 1.67
IRF3-220ENST00000598108 SIP14410 1827 aa25.49■■□□□ 1.67
IRF3-220ENST00000598108 DNM2P50570 870 aa25.48■■□□□ 1.67
IRF3-220ENST00000598108 FXR2P51116 673 aaKnown RBP eCLIP25.48■■□□□ 1.67
IRF3-220ENST00000598108 HTRA4P83105 476 aaPredicted RBP25.48■■□□□ 1.67
IRF3-220ENST00000598108 KSR1Q8IVT5 923 aa25.48■■□□□ 1.67
IRF3-220ENST00000598108 PIGOQ8TEQ8 1089 aa25.48■■□□□ 1.67
IRF3-220ENST00000598108 TMEM143Q96AN5 459 aa25.48■■□□□ 1.67
IRF3-220ENST00000598108 TSPYL2Q9H2G4 693 aaPredicted RBP25.48■■□□□ 1.67
IRF3-220ENST00000598108 CERS4Q9HA82 394 aa25.48■■□□□ 1.67
IRF3-220ENST00000598108 BMP2KQ9NSY1 1161 aaPredicted RBP25.48■■□□□ 1.67
IRF3-220ENST00000598108 PPME1Q9Y570 386 aa25.48■■□□□ 1.67
IRF3-220ENST00000598108 COL6A3P12111 3177 aa25.48■■□□□ 1.67
IRF3-220ENST00000598108 EVPLQ92817 2033 aa25.47■■□□□ 1.67
IRF3-220ENST00000598108 GPR182O15218 404 aa25.47■■□□□ 1.67
IRF3-220ENST00000598108 EIF4BP23588 611 aaKnown RBP25.47■■□□□ 1.67
IRF3-220ENST00000598108 ZNF710Q8N1W2 664 aa25.47■■□□□ 1.67
IRF3-220ENST00000598108 SLC7A3Q8WY07 619 aa25.47■■□□□ 1.67
IRF3-220ENST00000598108 JPH2Q9BR39 696 aaPredicted RBP25.47■■□□□ 1.67
IRF3-220ENST00000598108 POLR3CQ9BUI4 534 aaPredicted RBP25.47■■□□□ 1.67
IRF3-220ENST00000598108 FTHL17Q9BXU8 183 aa25.47■■□□□ 1.67
IRF3-220ENST00000598108 TUFT1Q9NNX1 390 aa25.47■■□□□ 1.67
IRF3-220ENST00000598108 ANKEF1Q9NU02 776 aa25.47■■□□□ 1.67
IRF3-220ENST00000598108 INSL6Q9Y581 213 aa25.47■■□□□ 1.67
IRF3-220ENST00000598108 VPS37CA5D8V6 355 aaPredicted RBP25.46■■□□□ 1.67
IRF3-220ENST00000598108 CSDE1O75534 798 aaKnown RBP25.46■■□□□ 1.67
IRF3-220ENST00000598108 DARSP14868 501 aaKnown RBP25.46■■□□□ 1.67
IRF3-220ENST00000598108 SYT1P21579 422 aa25.46■■□□□ 1.67
IRF3-220ENST00000598108 RFC5P40937 340 aa25.46■■□□□ 1.67
IRF3-220ENST00000598108 POLGP54098 1239 aaPredicted RBP25.46■■□□□ 1.67
IRF3-220ENST00000598108 FERMT3Q86UX7 667 aa25.46■■□□□ 1.67
IRF3-220ENST00000598108 RHPN2Q8IUC4 686 aa25.46■■□□□ 1.67
IRF3-220ENST00000598108 CRIPAKQ8N1N5 446 aa25.46■■□□□ 1.67
IRF3-220ENST00000598108 NLRP7Q8WX94 980 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms