RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 SMIM35A0A1B0GVV1 85 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 EPCAMP16422 314 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 PPM1AP35813 382 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 TDGQ13569 410 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 GRM4Q14833 912 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 CASD1Q96PB1 797 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 TMEM161AQ9NX61 479 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 ST3GAL5Q9UNP4 418 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 CACNA1IQ9P0X4 2223 aa17.75■□□□□ 0.43
LIG1-214ENST00000597146 NARSO43776 548 aaKnown RBP17.74■□□□□ 0.43
LIG1-214ENST00000597146 KRT17Q04695 432 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 ATAT1Q5SQI0 421 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 XRRA1Q6P2D8 792 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 MTHFD1LQ6UB35 978 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 TMC5Q6UXY8 1006 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 CYB5R4Q7L1T6 521 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 LRRC43Q8N309 656 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 AUTS2Q8WXX7 1259 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 TMEM117Q9H0C3 514 aa17.74■□□□□ 0.43
LIG1-214ENST00000597146 MEIS2O14770 477 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
LIG1-214ENST00000597146 SLC39A11Q8N1S5 342 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 RUBCNQ92622 972 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 KRT23Q9C075 422 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 AZI2Q9H6S1 392 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 KCNK12Q9HB15 430 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 SENP2Q9HC62 589 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 DZANK1Q9NVP4 752 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
LIG1-214ENST00000597146 SPG21Q9NZD8 308 aa17.73■□□□□ 0.43
LIG1-214ENST00000597146 MIA3Q5JRA6 1907 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.72■□□□□ 0.43
LIG1-214ENST00000597146 KRBA1A5PL33 1030 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 STK25O00506 426 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 CFHP08603 1231 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 MTMR1Q13613 665 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 FAM228AQ86W67 206 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 TICAM2Q86XR7 235 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 PLEKHM2Q8IWE5 1019 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 NME8Q8N427 588 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 CUL5Q93034 780 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 CDHR1Q96JP9 859 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 OSMRQ99650 979 aa17.72■□□□□ 0.43
LIG1-214ENST00000597146 JPH1Q9HDC5 661 aaPredicted RBP17.72■□□□□ 0.43
LIG1-214ENST00000597146 DOCK8Q8NF50 2099 aa17.71■□□□□ 0.43
LIG1-214ENST00000597146 PATJQ8NI35 1801 aa17.71■□□□□ 0.43
LIG1-214ENST00000597146 METAP2P50579 478 aaKnown RBP eCLIP17.71■□□□□ 0.43
LIG1-214ENST00000597146 FAM189BP81408 668 aa17.71■□□□□ 0.43
LIG1-214ENST00000597146 DSC3Q14574 896 aa17.71■□□□□ 0.43
LIG1-214ENST00000597146 IMMTQ16891 758 aaKnown RBP17.71■□□□□ 0.43
LIG1-214ENST00000597146 SPECC1Q5M775 1068 aa17.71■□□□□ 0.43
LIG1-214ENST00000597146 CCDC149Q6ZUS6 474 aa17.71■□□□□ 0.43
LIG1-214ENST00000597146 ACSF2Q96CM8 615 aaPredicted RBP17.71■□□□□ 0.43
LIG1-214ENST00000597146 ELAC1Q9H777 363 aaKnown RBP17.71■□□□□ 0.43
LIG1-214ENST00000597146 DIAPH3Q9NSV4 1193 aa17.71■□□□□ 0.43
LIG1-214ENST00000597146 UBIAD1Q9Y5Z9 338 aa17.71■□□□□ 0.43
LIG1-214ENST00000597146 NT5C1B-RDH14C9J2C7 533 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 HIP1O00291 1037 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 PIK3CDO00329 1044 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 GPR182O15218 404 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 SP9P0CG40 484 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 RFX1P22670 979 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 KLRC1P26715 233 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 KIZQ2M2Z5 673 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 CLLU1OSQ5K130 101 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 KIAA0319LQ8IZA0 1049 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 SLC9A2Q9UBY0 812 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 CA14Q9ULX7 337 aa17.7■□□□□ 0.42
LIG1-214ENST00000597146 CXCL14O95715 111 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 DCNP07585 359 aaKnown RBP17.69■□□□□ 0.42
LIG1-214ENST00000597146 SDSP20132 328 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 STAT5BP51692 787 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 ACTR2P61160 394 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 ST3GAL2Q16842 350 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 ZC3H14Q6PJT7 736 aaKnown RBP17.69■□□□□ 0.42
LIG1-214ENST00000597146 CWC27Q6UX04 472 aaKnown RBP17.69■□□□□ 0.42
LIG1-214ENST00000597146 OTOP3Q7RTS5 596 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 TMEM173Q86WV6 379 aaPredicted RBP17.69■□□□□ 0.42
LIG1-214ENST00000597146 ABI1Q8IZP0 508 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 RNF169Q8NCN4 708 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 SLC22A17Q8WUG5 538 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 RSAD2Q8WXG1 361 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 CNNM2Q9H8M5 875 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 TBC1D17Q9HA65 648 aa17.69■□□□□ 0.42
LIG1-214ENST00000597146 MYH9P35579 1960 aaKnown RBP17.69■□□□□ 0.42
LIG1-214ENST00000597146 COL4A3Q01955 1670 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 HOXA2O43364 376 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 UBE2SQ16763 222 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 ODR4Q5SWX8 454 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 PLPPR4Q7Z2D5 763 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 CABP7Q86V35 215 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 VPS52Q8N1B4 723 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 SUMF1Q8NBK3 374 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 TNPO1Q92973 898 aaKnown RBP17.68■□□□□ 0.42
LIG1-214ENST00000597146 OSBPL3Q9H4L5 887 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
LIG1-214ENST00000597146 N4BP1O75113 896 aaKnown RBP17.67■□□□□ 0.42
LIG1-214ENST00000597146 VTNP04004 478 aa17.67■□□□□ 0.42
LIG1-214ENST00000597146 TROAPQ12815 778 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms