RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 DRP2Q13474 957 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 SKIV2LQ15477 1246 aaKnown RBP14.71□□□□□ -0.05
LIG1-212ENST00000596549 PPP4R3AQ6IN85 833 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 NPAS4Q8IUM7 802 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 TMEM192Q8IY95 271 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 METTL13Q8N6R0 699 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 KIF2CQ99661 725 aa14.71□□□□□ -0.05
LIG1-212ENST00000596549 SEPT9Q9UHD8 586 aaPredicted RBP14.71□□□□□ -0.05
LIG1-212ENST00000596549 C5orf67F2Z3F1 127 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 WNT7AO00755 349 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 RPS6KA5O75582 802 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 GCFC2P16383 781 aaKnown RBP14.7□□□□□ -0.06
LIG1-212ENST00000596549 CTNNB1P35222 781 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 KRT2P35908 639 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 GATMP50440 423 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 FOSBP53539 338 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 CRYBB1P53674 252 aaPredicted RBP14.7□□□□□ -0.06
LIG1-212ENST00000596549 MRPS5P82675 430 aaKnown RBP14.7□□□□□ -0.06
LIG1-212ENST00000596549 NFX1Q12986 1120 aaKnown RBP14.7□□□□□ -0.06
LIG1-212ENST00000596549 PPP2R5CQ13362 524 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 EFCAB12Q6NXP0 572 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 FIBCD1Q8N539 461 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 BANK1Q8NDB2 785 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 SYMPKQ92797 1274 aaKnown RBP14.7□□□□□ -0.06
LIG1-212ENST00000596549 HAS1Q92839 578 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 CLP1Q92989 425 aaKnown RBP14.7□□□□□ -0.06
LIG1-212ENST00000596549 SH2D3AQ9BRG2 576 aa14.7□□□□□ -0.06
LIG1-212ENST00000596549 WRAP73Q9P2S5 460 aaPredicted RBP14.7□□□□□ -0.06
LIG1-212ENST00000596549 MAGEB2O15479 319 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 CCNT1O60563 726 aaKnown RBP14.69□□□□□ -0.06
LIG1-212ENST00000596549 MMP1P03956 469 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 GPC3P51654 580 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 SPIRE1Q08AE8 756 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 GPM6BQ13491 265 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 BTG3Q14201 252 aaPredicted RBP14.69□□□□□ -0.06
LIG1-212ENST00000596549 MTERF2Q49AM1 385 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 CMTR2Q8IYT2 770 aaKnown RBP14.69□□□□□ -0.06
LIG1-212ENST00000596549 ADAMTS19Q8TE59 1207 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 WASF1Q92558 559 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 MRPL38Q96DV4 380 aaKnown RBP14.69□□□□□ -0.06
LIG1-212ENST00000596549 ZNF668Q96K58 619 aaPredicted RBP14.69□□□□□ -0.06
LIG1-212ENST00000596549 ADAMTS10Q9H324 1103 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 ST3GAL5Q9UNP4 418 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 AKT3Q9Y243 479 aa14.69□□□□□ -0.06
LIG1-212ENST00000596549 MRPL42Q9Y6G3 142 aaKnown RBP14.69□□□□□ -0.06
LIG1-212ENST00000596549 BRWD1Q9NSI6 2320 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 C9IYK1 514 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 EIF5BO60841 1220 aaKnown RBP14.68□□□□□ -0.06
LIG1-212ENST00000596549 SARSP49591 514 aaKnown RBP14.68□□□□□ -0.06
LIG1-212ENST00000596549 NLRP11P59045 1033 aaKnown RBP14.68□□□□□ -0.06
LIG1-212ENST00000596549 TBC1D8BQ0IIM8 1120 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 DSC3Q14574 896 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 PAN2Q504Q3 1202 aaKnown RBP14.68□□□□□ -0.06
LIG1-212ENST00000596549 XKR3Q5GH77 459 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 ANO5Q75V66 913 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 MAP7D2Q96T17 732 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 NIFKQ9BYG3 293 aaKnown RBP14.68□□□□□ -0.06
LIG1-212ENST00000596549 RGS18Q9NS28 235 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 NRBP2Q9NSY0 501 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
LIG1-212ENST00000596549 IGKV6-21A0A0C4DH24 114 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 BTBD18B2RXH4 712 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 TBX3O15119 743 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 GRM6O15303 877 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 BMP1P13497 986 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 CCDC83Q8IWF9 413 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 DIS3L2Q8IYB7 885 aaKnown RBP14.67□□□□□ -0.06
LIG1-212ENST00000596549 FAM20AQ96MK3 541 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 NECAB3Q96P71 396 aaPredicted RBP14.67□□□□□ -0.06
LIG1-212ENST00000596549 ADAM2Q99965 735 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 COG5Q9UP83 839 aa14.67□□□□□ -0.06
LIG1-212ENST00000596549 DENND3A2RUS2 1198 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 GPR182O15218 404 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 STAG3L1P0CL83 205 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 IBSPP21815 317 aaPredicted RBP14.66□□□□□ -0.06
LIG1-212ENST00000596549 FGFR4P22455 802 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 BMPR1AP36894 532 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 PSMC5P62195 406 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 TIGD5Q53EQ6 642 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 HLA-CQ95604 372 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 NAP1L4Q99733 375 aaKnown RBP14.66□□□□□ -0.06
LIG1-212ENST00000596549 UBE2ZQ9H832 354 aaPredicted RBP14.66□□□□□ -0.06
LIG1-212ENST00000596549 BRMS1Q9HCU9 246 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 C1orf112Q9NSG2 853 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 RWDD3Q9Y3V2 267 aa14.66□□□□□ -0.06
LIG1-212ENST00000596549 RB1P06400 928 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 FGFR1P11362 822 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 DARSP14868 501 aaKnown RBP14.65□□□□□ -0.06
LIG1-212ENST00000596549 EIF4BP23588 611 aaKnown RBP14.65□□□□□ -0.06
LIG1-212ENST00000596549 TMOD1P28289 359 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 QARSP47897 775 aaKnown RBP14.65□□□□□ -0.06
LIG1-212ENST00000596549 NPEPPSP55786 919 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 CAMK1Q14012 370 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 PTPROQ16827 1216 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 TCEAL5Q5H9L2 206 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 ODR4Q5SWX8 454 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 FAM102BQ5T8I3 360 aa14.65□□□□□ -0.06
LIG1-212ENST00000596549 NCAPH2Q6IBW4 605 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms