RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 LINC01465Q8N7H1 131 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 DNAJB3Q8WWF6 145 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 JPH2Q9BR39 696 aaPredicted RBP16.65■□□□□ 0.26
DDX49-204ENST00000595858 TRIM43BA6NCK2 446 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 GOLGA6L4A6NEF3 574 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 KIAA0355O15063 1070 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 PLA2G4BP0C869 781 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 NAALADL2Q58DX5 795 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 PADI6Q6TGC4 694 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 RPAINQ86UA6 219 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 SYT2Q8N9I0 419 aaPredicted RBP16.65■□□□□ 0.26
DDX49-204ENST00000595858 RAD54LQ92698 747 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 TRIM43Q96BQ3 446 aaPredicted RBP16.65■□□□□ 0.26
DDX49-204ENST00000595858 NOC4LQ9BVI4 516 aaKnown RBP16.65■□□□□ 0.26
DDX49-204ENST00000595858 FAM49AQ9H0Q0 323 aaPredicted RBP16.65■□□□□ 0.26
DDX49-204ENST00000595858 HIPK3Q9H422 1215 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 PRDM5Q9NQX1 630 aaPredicted RBP16.65■□□□□ 0.26
DDX49-204ENST00000595858 BMP2KQ9NSY1 1161 aaPredicted RBP16.65■□□□□ 0.26
DDX49-204ENST00000595858 STK17AQ9UEE5 414 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 KCNH3Q9ULD8 1083 aa16.65■□□□□ 0.26
DDX49-204ENST00000595858 A0A1B0GVL5 298 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 USO1O60763 962 aaKnown RBP16.64■□□□□ 0.25
DDX49-204ENST00000595858 TMOD1P28289 359 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 CLCN3P51790 818 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 SLC12A3P55017 1021 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 MKRN4PQ13434 485 aaPredicted RBP16.64■□□□□ 0.25
DDX49-204ENST00000595858 BFSP2Q13515 415 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 EMC2Q15006 297 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 CAGE1Q8TC20 777 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 XPNPEP1Q9NQW7 623 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 EVPLQ92817 2033 aa16.64■□□□□ 0.25
DDX49-204ENST00000595858 FAM237AA0A1B0GTK4 181 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 POLR2DO15514 142 aaKnown RBP16.63■□□□□ 0.25
DDX49-204ENST00000595858 SSBP05455 408 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDX49-204ENST00000595858 CKBP12277 381 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 PFKFB1P16118 471 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 CYP11B2P19099 503 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 THPOP40225 353 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 STAT6P42226 847 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 DNM2P50570 870 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 RBL2Q08999 1139 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 DRP2Q13474 957 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 MCM6Q14566 821 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 RSPH3Q86UC2 560 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 NME8Q8N427 588 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 CCDC155Q8N6L0 562 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 LARP4BQ92615 738 aaKnown RBP16.63■□□□□ 0.25
DDX49-204ENST00000595858 ATP6V0A4Q9HBG4 840 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 PRKAG2Q9UGJ0 569 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 HPSEQ9Y251 543 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 PITPNM1O00562 1244 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 GAS2O43903 313 aaKnown RBP16.63■□□□□ 0.25
DDX49-204ENST00000595858 RPLP2P05387 115 aaKnown RBP16.63■□□□□ 0.25
DDX49-204ENST00000595858 ITGB8P26012 769 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 DHX8Q14562 1220 aaKnown RBP16.63■□□□□ 0.25
DDX49-204ENST00000595858 E2F4Q16254 413 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 RINT1Q6NUQ1 792 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 C1orf186Q6ZWK4 172 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 FSIP1Q8NA03 581 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 IQUBQ8NA54 791 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 MRPS27Q92552 414 aaKnown RBP16.63■□□□□ 0.25
DDX49-204ENST00000595858 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 DHX58Q96C10 678 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 MTRQ99707 1265 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 PPP1R12CQ9BZL4 782 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 NR2E3Q9Y5X4 410 aa16.63■□□□□ 0.25
DDX49-204ENST00000595858 UMODL1Q5DID0 1318 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 CAND2O75155 1236 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 TIMP1P01033 207 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 RAG1P15918 1043 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 CYP2C18P33260 490 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 NDUFA8P51970 172 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 ZNF618Q5T7W0 954 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 MAEAQ7L5Y9 396 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 MCPH1Q8NEM0 835 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 GBP4Q96PP9 640 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 MAP7D2Q96T17 732 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 RUSC1Q9BVN2 902 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 GOLPH3LQ9H4A5 285 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 SUCLA2Q9P2R7 463 aaPredicted RBP16.62■□□□□ 0.25
DDX49-204ENST00000595858 AKT3Q9Y243 479 aa16.62■□□□□ 0.25
DDX49-204ENST00000595858 VTNP04004 478 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 SYN1P17600 705 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 IER5Q5VY09 327 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 TCP11Q8WWU5 503 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 PYM1Q9BRP8 204 aaKnown RBP16.61■□□□□ 0.25
DDX49-204ENST00000595858 CUEDC2Q9H467 287 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 ZMYND8Q9ULU4 1186 aaPredicted RBP16.61■□□□□ 0.25
DDX49-204ENST00000595858 ARID2Q68CP9 1835 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
DDX49-204ENST00000595858 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
DDX49-204ENST00000595858 SELPP16109 830 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 SYKP43405 635 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 TMEM62Q0P6H9 643 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 ARSHQ5FYA8 562 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 TRAF7Q6Q0C0 670 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 SV2BQ7L1I2 683 aa16.61■□□□□ 0.25
DDX49-204ENST00000595858 PSPC1Q8WXF1 523 aaKnown RBP16.61■□□□□ 0.25
DDX49-204ENST00000595858 GPRC5CQ9NQ84 441 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms