RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 CCR3P51677 355 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 PLCB3Q01970 1234 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 KLRC3Q07444 240 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 PDE4DQ08499 809 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 G3BP1Q13283 466 aaKnown RBP eCLIP3.68□□□□□ -1.82
VRK3-204ENST00000593912 PPP2R5DQ14738 602 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 DGKDQ16760 1214 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 KRTAP21-3Q3LHN1 58 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 TAF1BQ53T94 588 aaPredicted RBP3.68□□□□□ -1.82
VRK3-204ENST00000593912 FAM26DQ5JW98 314 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 CCDC62Q6P9F0 684 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 SLC30A10Q6XR72 485 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 SCUBE3Q8IX30 993 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 GLG1Q92896 1179 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 NXPE3Q969Y0 559 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 KXD1Q9BQD3 176 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 KATNAL1Q9BW62 490 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 USP26Q9BXU7 913 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 SRCIN1Q9C0H9 1055 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 RNPEPQ9H4A4 650 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 EHMT1Q9H9B1 1298 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 WDR6Q9NNW5 1121 aaKnown RBP3.68□□□□□ -1.82
VRK3-204ENST00000593912 PUF60Q9UHX1 559 aaKnown RBP3.68□□□□□ -1.82
VRK3-204ENST00000593912 LRFN2Q9ULH4 789 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 PDZD2O15018 2839 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 NRCAMQ92823 1304 aa3.68□□□□□ -1.82
VRK3-204ENST00000593912 COL4A2P08572 1712 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 F5P12259 2224 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 DOCK5Q9H7D0 1870 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 TLN1Q9Y490 2541 aaKnown RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 CYP2D7A0A087X1C5 515 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 PTPDC1A2A3K4 754 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 CAPN8A6NHC0 703 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 NT5C1B-RDH14C9J2C7 533 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 H0Y626 953 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 NFIBO00712 420 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 RFPL2O75678 378 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 TRIM16O95361 564 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 CAVIN2O95810 425 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 STAG3L1P0CL83 205 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 FGFR1P11362 822 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 LAG3P18627 525 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 CR2P20023 1033 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 CALML3P27482 149 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 ARID4AP29374 1257 aaPredicted RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 HOXC8P31273 242 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 EIF2S3P41091 472 aaKnown RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 OAZ1P54368 228 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 CREB5Q02930 508 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 MGAT3Q09327 533 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 MVPQ14764 893 aaKnown RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 FBXO47Q5MNV8 452 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 KCNT2Q6UVM3 1135 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 RSPO2Q6UXX9 243 aaPredicted RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 ZNF852Q6ZMS4 543 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 LRRC55Q6ZSA7 311 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 SEPT14Q6ZU15 432 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 CACNA2D4Q7Z3S7 1137 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 WDR5BQ86VZ2 330 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 TMEM87AQ8NBN3 555 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 LIN37Q96GY3 246 aaPredicted RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 LOXL4Q96JB6 756 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 NEUROD6Q96NK8 337 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.67□□□□□ -1.82
VRK3-204ENST00000593912 CHMP4AQ9BY43 222 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 SLC32A1Q9H598 525 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 LMAN1LQ9HAT1 526 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 PIH1D3Q9NQM4 214 aaKnown RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 RBM12Q9NTZ6 932 aaKnown RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 SETD4Q9NVD3 440 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 MCM9Q9NXL9 1143 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 ISY1Q9ULR0 285 aaKnown RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 F8P00451 2351 aa3.67□□□□□ -1.82
VRK3-204ENST00000593912 PDCD11Q14690 1871 aaKnown RBP3.67□□□□□ -1.82
VRK3-204ENST00000593912 GOLGA4Q13439 2230 aaKnown RBP3.66□□□□□ -1.82
VRK3-204ENST00000593912 CCDC195A0A1B0GUA6 201 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 TEX51A0A1B0GUA7 166 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 TMEM232C9JQI7 657 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 C2CD2LO14523 706 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 INPPL1O15357 1258 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 MGEA5O60502 916 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 CAND2O75155 1236 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 RPP40O75818 363 aaKnown RBP3.66□□□□□ -1.82
VRK3-204ENST00000593912 CIAO1O76071 339 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 CCDC192P0DO97 292 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 C6P13671 934 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 EDNRBP24530 442 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 ADSSP30520 456 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 MAPK8P45983 427 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 CDK8P49336 464 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 METAP2P50579 478 aaKnown RBP eCLIP3.66□□□□□ -1.82
VRK3-204ENST00000593912 CLCN4P51793 760 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 IRX4P78413 519 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 NFKB2Q00653 900 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 KRT17Q04695 432 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 TFCP2Q12800 502 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 UBAP2LQ14157 1087 aaKnown RBP3.66□□□□□ -1.82
VRK3-204ENST00000593912 ZNF423Q2M1K9 1284 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 TMEM266Q2M3C6 531 aa3.66□□□□□ -1.82
VRK3-204ENST00000593912 GORABQ5T7V8 394 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms