RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 DYNC1I1O14576 645 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 PFKMP08237 780 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 SPATA31C1P0DKV0 1188 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 RPA1P27694 616 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 FAM26DQ5JW98 314 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 PLA2G4FQ68DD2 849 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 PSRC1Q6PGN9 363 aaPredicted RBP21.88■■□□□ 1.09
LSM4-203ENST00000593829 TDHQ8IZJ6 230 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 SH2D3AQ9BRG2 576 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 ZMYND15Q9H091 742 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 CYP26B1Q9NR63 512 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 R3HCC1Q9Y3T6 440 aaKnown RBP21.88■■□□□ 1.09
LSM4-203ENST00000593829 VWA3AA6NCI4 1184 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 MED24O75448 989 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 F13A1P00488 732 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 IER5Q5VY09 327 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 KIAA0319LQ8IZA0 1049 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 CEP170P1Q96L14 293 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 CEP89Q96ST8 783 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 FTOQ9C0B1 505 aaKnown RBP eCLIP21.88■■□□□ 1.09
LSM4-203ENST00000593829 PPME1Q9Y570 386 aa21.88■■□□□ 1.09
LSM4-203ENST00000593829 ZBTB39O15060 712 aa21.87■■□□□ 1.09
LSM4-203ENST00000593829 TMOD1P28289 359 aa21.87■■□□□ 1.09
LSM4-203ENST00000593829 NPEPPSP55786 919 aa21.87■■□□□ 1.09
LSM4-203ENST00000593829 GPNMBQ14956 572 aa21.87■■□□□ 1.09
LSM4-203ENST00000593829 TMEM240Q5SV17 173 aa21.87■■□□□ 1.09
LSM4-203ENST00000593829 EFCAB12Q6NXP0 572 aa21.87■■□□□ 1.09
LSM4-203ENST00000593829 VWCEQ96DN2 955 aa21.87■■□□□ 1.09
LSM4-203ENST00000593829 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.87■■□□□ 1.09
LSM4-203ENST00000593829 ANKEF1Q9NU02 776 aa21.87■■□□□ 1.09
LSM4-203ENST00000593829 NBNO60934 754 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 FGBP02675 491 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 CHRNA1P02708 482 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 MUTP22033 750 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 CCT6AP40227 531 aaKnown RBP21.86■■□□□ 1.09
LSM4-203ENST00000593829 MRPS6P82932 125 aaKnown RBP21.86■■□□□ 1.09
LSM4-203ENST00000593829 CEBPZQ03701 1054 aaKnown RBP21.86■■□□□ 1.09
LSM4-203ENST00000593829 MBTPS1Q14703 1052 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 SHHQ15465 462 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 C9orf50Q5SZB4 431 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 KRT79Q5XKE5 535 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 ZNF365Q70YC5 407 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 ZNF396Q96N95 335 aaPredicted RBP21.86■■□□□ 1.09
LSM4-203ENST00000593829 SUGCTQ9HAC7 445 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 M0QZ92 97 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 CXCL10P02778 98 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 PTPAQ15257 358 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 XKR9Q5GH70 373 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 SASS6Q6UVJ0 657 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 EXOC8Q8IYI6 725 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 LINC01465Q8N7H1 131 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 SNX29Q8TEQ0 813 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 PKNOX2Q96KN3 472 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 NACC1Q96RE7 527 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 USP28Q96RU2 1077 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 JPH2Q9BR39 696 aaPredicted RBP21.86■■□□□ 1.09
LSM4-203ENST00000593829 CDY2AQ9Y6F7 541 aa21.86■■□□□ 1.09
LSM4-203ENST00000593829 RANBP2P49792 3224 aaKnown RBP21.85■■□□□ 1.09
LSM4-203ENST00000593829 MAFO75444 373 aaPredicted RBP21.85■■□□□ 1.09
LSM4-203ENST00000593829 CLCN3P51790 818 aa21.85■■□□□ 1.09
LSM4-203ENST00000593829 MGAT3Q09327 533 aa21.85■■□□□ 1.09
LSM4-203ENST00000593829 TMEM62Q0P6H9 643 aa21.85■■□□□ 1.09
LSM4-203ENST00000593829 LRRC71Q8N4P6 559 aa21.85■■□□□ 1.09
LSM4-203ENST00000593829 ZNF579Q8NAF0 562 aaKnown RBP21.85■■□□□ 1.09
LSM4-203ENST00000593829 CCDC43Q96MW1 224 aaKnown RBP21.85■■□□□ 1.09
LSM4-203ENST00000593829 IGKV6-21A0A0C4DH24 114 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 PP2D1A8MPX8 630 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 SCN5AQ14524 2016 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 POTEGQ6S5H5 508 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 PIGOQ8TEQ8 1089 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 SLC7A3Q8WY07 619 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 TRPV2Q9Y5S1 764 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 ACTN1P12814 892 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 CDC25AP30304 524 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 RFC5P40937 340 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 DNM2P50570 870 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 POLGP54098 1239 aaPredicted RBP21.84■■□□□ 1.09
LSM4-203ENST00000593829 AK8Q96MA6 479 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 CELF4Q9BZC1 486 aaKnown RBP21.84■■□□□ 1.09
LSM4-203ENST00000593829 AKT3Q9Y243 479 aa21.84■■□□□ 1.09
LSM4-203ENST00000593829 A0A087WWV3 80 aa21.83■■□□□ 1.09
LSM4-203ENST00000593829 OTOP2Q7RTS6 562 aa21.83■■□□□ 1.09
LSM4-203ENST00000593829 HERVK_113Q902F9 699 aa21.83■■□□□ 1.09
LSM4-203ENST00000593829 RNPC3Q96LT9 517 aaKnown RBP21.83■■□□□ 1.09
LSM4-203ENST00000593829 MMTAG2Q9BU76 263 aaKnown RBP21.83■■□□□ 1.09
LSM4-203ENST00000593829 DHX33Q9H6R0 707 aaKnown RBP21.83■■□□□ 1.09
LSM4-203ENST00000593829 UQCRHLA0A096LP55 91 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 LETM1O95202 739 aaPredicted RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 UQCRHP07919 91 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 MARCKSP29966 332 aaPredicted RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 RARRES1P49788 294 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 SLC39A14Q15043 492 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 ECM1Q16610 540 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 ZNF710Q8N1W2 664 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 MTIF3Q9H2K0 278 aaKnown RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 DBR1Q9UK59 544 aaKnown RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 KIAA1024Q9UPX6 916 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 MORC2Q9Y6X9 1032 aaPredicted RBP21.82■■□□□ 1.08
LSM4-203ENST00000593829 KDM3AQ9Y4C1 1321 aa21.82■■□□□ 1.08
LSM4-203ENST00000593829 VTNP04004 478 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms