RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 FAM213AQ9BRX8 229 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 RNF181Q9P0P0 153 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 PNMA3Q9UL41 463 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 DDR1Q08345 913 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 DRAP1Q14919 205 aaPredicted RBP16.43■□□□□ 0.22
SYMPK-202ENST00000593504 SETDB1Q15047 1291 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 TAF12Q16514 161 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 RHOT2Q8IXI1 618 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 OTUD5Q96G74 571 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 RUNDC3BQ96NL0 473 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 MED10Q9BTT4 135 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 EHD4Q9H223 541 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 HDAC6Q9UBN7 1215 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 HAUS6Q7Z4H7 955 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 AGPAT5Q9NUQ2 364 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 MRFAP1Q9Y605 127 aa16.43■□□□□ 0.22
SYMPK-202ENST00000593504 DDTLA6NHG4 134 aaPredicted RBP16.42■□□□□ 0.22
SYMPK-202ENST00000593504 YWHABP31946 246 aaKnown RBP16.42■□□□□ 0.22
SYMPK-202ENST00000593504 GBP1P32455 592 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 MRPS25P82663 173 aaKnown RBP16.42■□□□□ 0.22
SYMPK-202ENST00000593504 TCP11Q8WWU5 503 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 FAM167AQ96KS9 214 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 MTRQ99707 1265 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 MRPL47Q9HD33 250 aaKnown RBP16.42■□□□□ 0.22
SYMPK-202ENST00000593504 PPANQ9NQ55 473 aaKnown RBP16.42■□□□□ 0.22
SYMPK-202ENST00000593504 SMIM22K7EJ46 135 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 GYPCP04921 128 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 MXRA7P84157 204 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 BAATQ14032 418 aaPredicted RBP16.42■□□□□ 0.22
SYMPK-202ENST00000593504 AGBL3Q8NEM8 1001 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 GOLGA8SH3BPF8 625 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 GRB10Q13322 594 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 COG2Q14746 738 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 SURF1Q15526 300 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 C6orf163Q5TEZ5 329 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 SAAL1Q96ER3 474 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 KIAA1586Q9HCI6 787 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 PNMA6AP0CW24 399 aaPredicted RBP16.42■□□□□ 0.22
SYMPK-202ENST00000593504 RPA1P27694 616 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 CASP8Q14790 479 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 KCTD16Q68DU8 428 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 PPP1R2P3Q6NXS1 205 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 RAD9BQ6WBX8 426 aa16.42■□□□□ 0.22
SYMPK-202ENST00000593504 MKRN1Q9UHC7 482 aaKnown RBP16.42■□□□□ 0.22
SYMPK-202ENST00000593504 NEDD9Q14511 834 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 SGO2Q562F6 1265 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 SCARA5Q6ZMJ2 495 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 RNF10Q8N5U6 811 aaKnown RBP16.41■□□□□ 0.22
SYMPK-202ENST00000593504 SH2D3AQ9BRG2 576 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 POLR3FQ9H1D9 316 aaPredicted RBP16.41■□□□□ 0.22
SYMPK-202ENST00000593504 RIOX1Q9H6W3 641 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 ODF2LQ9ULJ1 636 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 SNX1Q13596 522 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 ZSCAN26Q16670 478 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 RASGRP2Q7LDG7 609 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 THNSL1Q8IYQ7 743 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 ZNF280CQ8ND82 737 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 FBF1Q8TES7 1133 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 CAPS2Q9BXY5 557 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 CLDN3O15551 220 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 NCK2O43639 380 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 MYBP10242 640 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 ECE1P42892 770 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 GMPSP49915 693 aaPredicted RBP16.41■□□□□ 0.22
SYMPK-202ENST00000593504 DNAJC24Q6P3W2 148 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 RPUSD2Q8IZ73 545 aaKnown RBP16.41■□□□□ 0.22
SYMPK-202ENST00000593504 AGBL1Q96MI9 1066 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 HSPA6P17066 643 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 NFRKBQ6P4R8 1299 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 AP5M1Q9H0R1 490 aa16.41■□□□□ 0.22
SYMPK-202ENST00000593504 RPF1Q9H9Y2 349 aaKnown RBP16.41■□□□□ 0.22
SYMPK-202ENST00000593504 PLTPP55058 493 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 ANGEL2Q5VTE6 544 aaKnown RBP16.4■□□□□ 0.22
SYMPK-202ENST00000593504 FAN1Q9Y2M0 1017 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 CACNA1FO60840 1977 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 LMO7Q8WWI1 1683 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 SLC16A3O15427 465 aaKnown RBP16.4■□□□□ 0.22
SYMPK-202ENST00000593504 PPFIA4O75335 1185 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 STAMBPO95630 424 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 MAN1A1P33908 653 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 HHATQ5VTY9 493 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 PRAMEF18Q5VWM3 479 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 CATSPER3Q86XQ3 398 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 ANKRD42Q8N9B4 389 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 BBOF1Q8ND07 529 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 MGARPQ8TDB4 240 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 CABS1Q96KC9 395 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 EPC1Q9H2F5 836 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 EMSYQ7Z589 1322 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.4■□□□□ 0.22
SYMPK-202ENST00000593504 RNF40O75150 1001 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 HOXA10P31260 410 aaPredicted RBP16.4■□□□□ 0.22
SYMPK-202ENST00000593504 SHMT1P34896 483 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 FGGP02679 453 aa16.4■□□□□ 0.22
SYMPK-202ENST00000593504 ATP1A1P05023 1023 aaKnown RBP16.4■□□□□ 0.22
SYMPK-202ENST00000593504 TAB3Q8N5C8 712 aaPredicted RBP16.4■□□□□ 0.22
SYMPK-202ENST00000593504 OSBPL9Q96SU4 736 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms