RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 SEPT14Q6ZU15 432 aa13.12□□□□□ -0.31
NPC1-214ENST00000593280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
NPC1-214ENST00000593280 KSR1Q8IVT5 923 aa13.12□□□□□ -0.31
NPC1-214ENST00000593280 SYCP3Q8IZU3 236 aa13.12□□□□□ -0.31
NPC1-214ENST00000593280 FAM133AQ8N9E0 248 aa13.12□□□□□ -0.31
NPC1-214ENST00000593280 MPHOSPH6Q99547 160 aaKnown RBP13.12□□□□□ -0.31
NPC1-214ENST00000593280 GBP3Q9H0R5 595 aa13.12□□□□□ -0.31
NPC1-214ENST00000593280 TXNRD2Q9NNW7 524 aa13.12□□□□□ -0.31
NPC1-214ENST00000593280 PNMA3Q9UL41 463 aa13.12□□□□□ -0.31
NPC1-214ENST00000593280 PHLPP2Q6ZVD8 1323 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 MYH9P35579 1960 aaKnown RBP13.11□□□□□ -0.31
NPC1-214ENST00000593280 SORBS3O60504 671 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 AKAP3O75969 853 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 XRCC5P13010 732 aaKnown RBP13.11□□□□□ -0.31
NPC1-214ENST00000593280 EDNRBP24530 442 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 NPEPPSP55786 919 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 FSTL1Q12841 308 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 FAM102BQ5T8I3 360 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 SWSAP1Q6NVH7 229 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 WDR59Q6PJI9 974 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 ABHD15Q6UXT9 468 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 ANO5Q75V66 913 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 TRMT1LQ7Z2T5 733 aaKnown RBP13.11□□□□□ -0.31
NPC1-214ENST00000593280 CCDC155Q8N6L0 562 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 SLC17A8Q8NDX2 589 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 ACRBPQ8NEB7 543 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 CHP1Q99653 195 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 SH2D3AQ9BRG2 576 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 STRA6Q9BX79 667 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 EDEM3Q9BZQ6 932 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 RBPJLQ9UBG7 517 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 IGSF9BQ9UPX0 1349 aa13.11□□□□□ -0.31
NPC1-214ENST00000593280 EPHB6O15197 1021 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 ZNF862O60290 1169 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 NDUFA10O95299 355 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 AFPP02771 609 aaKnown RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 POTEJP0CG39 1038 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 GTF2F1P35269 517 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPC1-214ENST00000593280 SP2Q02086 613 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 PRKCEQ02156 737 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 KCNMA1Q12791 1236 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 KCNH2Q12809 1159 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 KCTD2Q14681 263 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 DCAF17Q5H9S7 520 aaPredicted RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 TRIM65Q6PJ69 517 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 CYFIP1Q7L576 1253 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 CCDC60Q8IWA6 550 aaPredicted RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 ACCSQ96QU6 501 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 MMP19Q99542 508 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 MKNK1Q9BUB5 465 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 LSM14BQ9BX40 385 aaKnown RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 TMEM206Q9H813 350 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 AGPAT3Q9NRZ7 376 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 SEPT9Q9UHD8 586 aaPredicted RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 DNAI1Q9UI46 699 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 UBA1P22314 1058 aaKnown RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 HNRNPH3P31942 346 aaKnown RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 CYLC1P35663 651 aaPredicted RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 PSMC2P35998 433 aaKnown RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 CASP4P49662 377 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 CDK17Q00537 523 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 CACNA2D4Q7Z3S7 1137 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 FAM186BQ8IYM0 893 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 IKZF4Q9H2S9 585 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 ST6GALNAC4Q9H4F1 302 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 MROH8Q9H579 483 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 GPRC5CQ9NQ84 441 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 CEP72Q9P209 647 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 FRMD4BQ9Y2L6 1034 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 TELO2Q9Y4R8 837 aa13.1□□□□□ -0.31
NPC1-214ENST00000593280 EPN1Q9Y6I3 576 aaPredicted RBP13.1□□□□□ -0.31
NPC1-214ENST00000593280 PLXNB2O15031 1838 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 DYNC1I1O14576 645 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 STBD1O95210 358 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 PGK2P07205 417 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 CYP2J2P51589 502 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 NCKAP1LP55160 1127 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 PEX3P56589 373 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 GNG11P61952 73 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 ERVK-9P63128 1117 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 FKBP1BP68106 108 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 DMP1Q13316 513 aaPredicted RBP13.09□□□□□ -0.31
NPC1-214ENST00000593280 Q3C1V9 767 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 ARHGAP29Q52LW3 1261 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 WDR78Q5VTH9 848 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 TCERG1LQ5VWI1 586 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 PDXDC1Q6P996 788 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 RRAGAQ7L523 313 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 HAUS6Q7Z4H7 955 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 CCDC170Q8IYT3 715 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 MCPH1Q8NEM0 835 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 KIFAP3Q92845 792 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 LZTFL1Q9NQ48 299 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 ZNF302Q9NR11 478 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 DMAC2Q9NW81 257 aa13.09□□□□□ -0.31
NPC1-214ENST00000593280 CGNQ9P2M7 1197 aaKnown RBP13.09□□□□□ -0.31
NPC1-214ENST00000593280 PLAGL2Q9UPG8 496 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms