RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ZDHHC14Q8IZN3 488 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 FAM177A1Q8N128 213 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-216ENST00000593223 ATL2Q8NHH9 583 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 FEZF2Q8TBJ5 459 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 MAML3Q96JK9 1138 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 ATAD2BQ9ULI0 1458 aa6.77□□□□□ -1.33
SMAD4-216ENST00000593223 MROH6A6NGR9 719 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 TGM5O43548 720 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 BRINP1O60477 761 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 KLHL18O94889 574 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 PRLP01236 227 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 ID4P47928 161 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 RGS3P49796 1198 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 SMAD3P84022 425 aaKnown RBP6.76□□□□□ -1.33
SMAD4-216ENST00000593223 CD83Q01151 205 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 HDGFL2Q7Z4V5 671 aaPredicted RBP6.76□□□□□ -1.33
SMAD4-216ENST00000593223 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 SLC5A5Q92911 643 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 ZMAT4Q9H898 229 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 PARD6AQ9NPB6 346 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 FBXO10Q9UK96 956 aa6.76□□□□□ -1.33
SMAD4-216ENST00000593223 APOBEC2Q9Y235 224 aaKnown RBP6.76□□□□□ -1.33
SMAD4-216ENST00000593223 SYNJ2O15056 1496 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 C9orf118A6NHY6 69 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 NOBOXO60393 691 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 POLD1P28340 1107 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 MAP3K12Q12852 859 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 NFATC3Q12968 1075 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 MOGSQ13724 837 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 LRRC32Q14392 662 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 STILQ15468 1287 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 BROXQ5VW32 411 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 BORAQ6PGQ7 559 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 Q6ZUG5 572 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 IFNL2Q8IZJ0 200 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 KLHL36Q8N4N3 616 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 KCNC2Q96PR1 638 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 POFUT1Q9H488 388 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 MSRAQ9UJ68 235 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 CDC42EP3Q9UKI2 254 aa6.75□□□□□ -1.33
SMAD4-216ENST00000593223 ANKRD62A6NC57 917 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 CUTAO60888 179 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 ULK1O75385 1050 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 KCNQ1P51787 676 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 TMPRSS15P98073 1019 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 TERF2Q15554 542 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 KANK2Q63ZY3 851 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 GRAMD4Q6IC98 578 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 ZNF610Q8N9Z0 462 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 WDR66Q8TBY9 1149 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 RPGRQ92834 1020 aaKnown RBP6.74□□□□□ -1.33
SMAD4-216ENST00000593223 KRTAP4-11Q9BYQ6 195 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 MCM8Q9UJA3 840 aa6.74□□□□□ -1.33
SMAD4-216ENST00000593223 NOC2LQ9Y3T9 749 aaKnown RBP6.74□□□□□ -1.33
SMAD4-216ENST00000593223 A0A0G2JNJ9 132 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-216ENST00000593223 OTOL1A6NHN0 477 aaPredicted RBP6.73□□□□□ -1.33
SMAD4-216ENST00000593223 PRPF6O94906 941 aaKnown RBP6.73□□□□□ -1.33
SMAD4-216ENST00000593223 HMGCRP04035 888 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 INHBBP09529 407 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 PHC1P78364 1004 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 ADCY2Q08462 1091 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 STAT4Q14765 748 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 NOLC1Q14978 699 aaKnown RBP eCLIP6.73□□□□□ -1.33
SMAD4-216ENST00000593223 GPR158Q5T848 1215 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 SPOCD1Q6ZMY3 1216 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 ESPNLQ6ZVH7 1005 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 RALYLQ86SE5 291 aaKnown RBP6.73□□□□□ -1.33
SMAD4-216ENST00000593223 FERMT2Q96AC1 680 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 MYL10Q9BUA6 226 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 MS4A5Q9H3V2 200 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 Q9UFV3 132 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 KCNG1Q9UIX4 513 aa6.73□□□□□ -1.33
SMAD4-216ENST00000593223 ST20-MTHFSA0A0A6YYL1 179 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 MAFGO15525 162 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 SESN3P58005 492 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 TOP3AQ13472 1001 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-216ENST00000593223 MYBPC3Q14896 1274 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 FRMD7Q6ZUT3 714 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 GPR155Q7Z3F1 870 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 REXO1L1PQ8IX06 675 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 KBTBD2Q8IY47 623 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 LGI4Q8N135 537 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 CARD11Q9BXL7 1154 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 FAM126AQ9BYI3 521 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-216ENST00000593223 USP36Q9P275 1121 aaKnown RBP6.72□□□□□ -1.33
SMAD4-216ENST00000593223 ADAM29Q9UKF5 820 aa6.72□□□□□ -1.33
SMAD4-216ENST00000593223 RSF1Q96T23 1441 aaPredicted RBP6.72□□□□□ -1.33
SMAD4-216ENST00000593223 LCHNA4D1U4 455 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 KDM1AO60341 852 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 B4GALT4O60513 344 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 EYA4O95677 639 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 ETV4P43268 484 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 MEOX1P50221 254 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 RRADP55042 308 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 BCAR1P56945 870 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 USP10Q14694 798 aaKnown RBP6.71□□□□□ -1.34
SMAD4-216ENST00000593223 ZNF568Q3ZCX4 644 aa6.71□□□□□ -1.34
SMAD4-216ENST00000593223 RASSF3Q86WH2 238 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms