RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 LONRF3Q496Y0 759 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 MTERF2Q49AM1 385 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 PSRC1Q6PGN9 363 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-220ENST00000593008 DEFB123Q8N688 67 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 ENGASEQ8NFI3 743 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 ERMNQ8TAM6 284 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 AFAP1L1Q8TED9 768 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 ATP6V0A1Q93050 837 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 AK8Q96MA6 479 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 FAM161BQ96MY7 647 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 RUSC1Q9BVN2 902 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 CCSER1Q9C0I3 900 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 TUFT1Q9NNX1 390 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 SETD4Q9NVD3 440 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 CXXC1Q9P0U4 656 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-220ENST00000593008 ZNF215Q9UL58 517 aaPredicted RBP10.77□□□□□ -0.69
DDX39A-220ENST00000593008 KCNH3Q9ULD8 1083 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 TRPC6Q9Y210 931 aa10.77□□□□□ -0.69
DDX39A-220ENST00000593008 DDX11L8A8MPP1 907 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 ZBBXA8MT70 800 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 PITPNM1O00562 1244 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 TREHO43280 583 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 SSBP05455 408 aaKnown RBP eCLIP10.76□□□□□ -0.69
DDX39A-220ENST00000593008 P4HBP07237 508 aaKnown RBP10.76□□□□□ -0.69
DDX39A-220ENST00000593008 CKBP12277 381 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 YWHABP31946 246 aaKnown RBP10.76□□□□□ -0.69
DDX39A-220ENST00000593008 THPOP40225 353 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 STAT6P42226 847 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 UBE2HP62256 183 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 PTK7Q13308 1070 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 DRP2Q13474 957 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 HYIQ5T013 277 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 FAM160B1Q5W0V3 765 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 HAUS3Q68CZ6 603 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 CKAP2LQ8IYA6 745 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 FMR1NBQ8N0W7 255 aaPredicted RBP10.76□□□□□ -0.69
DDX39A-220ENST00000593008 CCDC155Q8N6L0 562 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 RDM1Q8NG50 284 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 ATP8B4Q8TF62 1192 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 LMBR1Q8WVP7 490 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 RAD54LQ92698 747 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 CEP89Q96ST8 783 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 RAB34Q9BZG1 259 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 BLZF1Q9H2G9 400 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 BHMT2Q9H2M3 363 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 AZI2Q9H6S1 392 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 ZSWIM4Q9H7M6 989 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 GPRC5CQ9NQ84 441 aa10.76□□□□□ -0.69
DDX39A-220ENST00000593008 USO1O60763 962 aaKnown RBP10.75□□□□□ -0.69
DDX39A-220ENST00000593008 PLA2G4BP0C869 781 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 INSRRP14616 1297 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 SELPP16109 830 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 PPFIA1Q13136 1202 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 TRIM71Q2Q1W2 868 aaKnown RBP10.75□□□□□ -0.69
DDX39A-220ENST00000593008 MARCH8Q5T0T0 291 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 ZNF618Q5T7W0 954 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 RRAGBQ5VZM2 374 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 RUFY4Q6ZNE9 571 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 LRRC8DQ7L1W4 858 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 MAEAQ7L5Y9 396 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 PLPPR4Q7Z2D5 763 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 SERINC5Q86VE9 423 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 RPUSD2Q8IZ73 545 aaKnown RBP10.75□□□□□ -0.69
DDX39A-220ENST00000593008 CAGE1Q8TC20 777 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 HERVK_113Q902F9 699 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 CDK5RAP3Q96JB5 506 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 ZNF668Q96K58 619 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-220ENST00000593008 PPP1R16BQ96T49 567 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 SMARCAD1Q9H4L7 1026 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 XPNPEP1Q9NQW7 623 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 DACT1Q9NYF0 836 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 FAM13BQ9NYF5 915 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 ERAP1Q9NZ08 941 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 KDM3AQ9Y4C1 1321 aa10.75□□□□□ -0.69
DDX39A-220ENST00000593008 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-220ENST00000593008 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-220ENST00000593008 GOLGA6L4A6NEF3 574 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 RSPH10B2B2RC85 870 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 NBNO60934 754 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 LYPLA2O95372 231 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 CTSHP09668 335 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 RSPH10BP0C881 870 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 HOXC8P31273 242 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 TXLNAP40222 546 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 PBX2P40425 430 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 SYKP43405 635 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 AFMP43652 599 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 RARRES1P49788 294 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 SLC12A3P55017 1021 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 SMAD3P84022 425 aaKnown RBP10.74□□□□□ -0.69
DDX39A-220ENST00000593008 FAM160A1Q05DH4 1040 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 MKRN4PQ13434 485 aaPredicted RBP10.74□□□□□ -0.69
DDX39A-220ENST00000593008 GPNMBQ14956 572 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 TARBP2Q15633 366 aaKnown RBP10.74□□□□□ -0.69
DDX39A-220ENST00000593008 GRIK4Q16099 956 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 ARSHQ5FYA8 562 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 XKR9Q5GH70 373 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 XKR3Q5GH77 459 aa10.74□□□□□ -0.69
DDX39A-220ENST00000593008 CCDC73Q6ZRK6 1079 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms