RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRIM47-206ENST00000592942 OTUD6AQ7L8S5 288 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 PIGOQ8TEQ8 1089 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 CEP170P1Q96L14 293 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 MMTAG2Q9BU76 263 aaKnown RBP17.13■□□□□ 0.33
TRIM47-206ENST00000592942 ANKEF1Q9NU02 776 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 LRWD1Q9UFC0 647 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 SLC4A7Q9Y6M7 1214 aa17.13■□□□□ 0.33
TRIM47-206ENST00000592942 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-206ENST00000592942 PP2D1A8MPX8 630 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 CDC25AP30304 524 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 PBX2P40425 430 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 DEFB103AP81534 67 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 IKBKEQ14164 716 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 PTPAQ15257 358 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 SF3A1Q15459 793 aaKnown RBP17.12■□□□□ 0.33
TRIM47-206ENST00000592942 KIZQ2M2Z5 673 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 XKR9Q5GH70 373 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 DTHD1Q6ZMT9 781 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 RTN4RL1Q86UN2 441 aaPredicted RBP17.12■□□□□ 0.33
TRIM47-206ENST00000592942 SEPT8Q92599 483 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 PPME1Q9Y570 386 aa17.12■□□□□ 0.33
TRIM47-206ENST00000592942 LOXHD1Q8IVV2 1947 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 ZBBXA8MT70 800 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 TMOD1P28289 359 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 CD52P31358 61 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 RARRES1P49788 294 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 GPC3P51654 580 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 CRYBB1P53674 252 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-206ENST00000592942 NLRP11P59045 1033 aaKnown RBP17.11■□□□□ 0.33
TRIM47-206ENST00000592942 PKP1Q13835 747 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 TMEM266Q2M3C6 531 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 ARL6IP4Q66PJ3 421 aaKnown RBP17.11■□□□□ 0.33
TRIM47-206ENST00000592942 GPR153Q6NV75 609 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 TSHZ1Q6ZSZ6 1077 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 USP38Q8NB14 1042 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 PHOSPHO2Q8TCD6 241 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
TRIM47-206ENST00000592942 PPP1R16BQ96T49 567 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 PBX4Q9BYU1 374 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
TRIM47-206ENST00000592942 MTIF3Q9H2K0 278 aaKnown RBP17.11■□□□□ 0.33
TRIM47-206ENST00000592942 TMX1Q9H3N1 280 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 XPNPEP1Q9NQW7 623 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 PADI3Q9ULW8 664 aa17.11■□□□□ 0.33
TRIM47-206ENST00000592942 NOC2LQ9Y3T9 749 aaKnown RBP17.11■□□□□ 0.33
TRIM47-206ENST00000592942 PTPRSQ13332 1948 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 ENPP3O14638 875 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 ATP2A2P16615 1042 aaKnown RBP17.1■□□□□ 0.33
TRIM47-206ENST00000592942 MUTP22033 750 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 RABGGTBP53611 331 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 GRIN1Q05586 938 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 TMCO2Q7Z6W1 182 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-206ENST00000592942 APBB2Q92870 758 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 NACC1Q96RE7 527 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 OSMRQ99650 979 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 ZSCAN16Q9H4T2 348 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-206ENST00000592942 SUCLA2Q9P2R7 463 aaPredicted RBP17.1■□□□□ 0.33
TRIM47-206ENST00000592942 AKT3Q9Y243 479 aa17.1■□□□□ 0.33
TRIM47-206ENST00000592942 VWA3AA6NCI4 1184 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 M0QZ92 97 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 HSP90AA1P07900 732 aaKnown RBP17.09■□□□□ 0.33
TRIM47-206ENST00000592942 MYOGP15173 224 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 CCT6AP40227 531 aaKnown RBP17.09■□□□□ 0.33
TRIM47-206ENST00000592942 RFC5P40937 340 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 TMEM143Q96AN5 459 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 MAP7D2Q96T17 732 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 ERVK-5Q9HDB9 667 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 DBR1Q9UK59 544 aaKnown RBP17.09■□□□□ 0.33
TRIM47-206ENST00000592942 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
TRIM47-206ENST00000592942 YBX2Q9Y2T7 364 aaKnown RBP17.09■□□□□ 0.33
TRIM47-206ENST00000592942 MICAL3Q7RTP6 2002 aa17.08■□□□□ 0.33
TRIM47-206ENST00000592942 EFCAB14O75071 495 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 POLGP54098 1239 aaPredicted RBP17.08■□□□□ 0.32
TRIM47-206ENST00000592942 FAM228AQ86W67 206 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 HERC6Q8IVU3 1022 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 CRIPAKQ8N1N5 446 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 ZNF710Q8N1W2 664 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 PRPF31Q8WWY3 499 aaKnown RBP17.08■□□□□ 0.32
TRIM47-206ENST00000592942 SLC7A3Q8WY07 619 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 USP28Q96RU2 1077 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 SLC9A7Q96T83 725 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 JPH2Q9BR39 696 aaPredicted RBP17.08■□□□□ 0.32
TRIM47-206ENST00000592942 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.32
TRIM47-206ENST00000592942 ST3GAL5Q9UNP4 418 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 KIAA1024Q9UPX6 916 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 ZDHHC9Q9Y397 364 aa17.08■□□□□ 0.32
TRIM47-206ENST00000592942 CDH23Q9H251 3354 aa17.07■□□□□ 0.32
TRIM47-206ENST00000592942 MGEA5O60502 916 aa17.07■□□□□ 0.32
TRIM47-206ENST00000592942 CSDE1O75534 798 aaKnown RBP17.07■□□□□ 0.32
TRIM47-206ENST00000592942 RPS6KA5O75582 802 aa17.07■□□□□ 0.32
TRIM47-206ENST00000592942 BMP15O95972 392 aa17.07■□□□□ 0.32
TRIM47-206ENST00000592942 ZSCAN22P10073 491 aaPredicted RBP17.07■□□□□ 0.32
TRIM47-206ENST00000592942 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
TRIM47-206ENST00000592942 EIF4BP23588 611 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms