RNA–Protein interactions for RNA: ENST00000592445.1

PRKCSH-216, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-216ENST00000592445 TMC7Q7Z402 723 aa22.35■■□□□ 1.17
PRKCSH-216ENST00000592445 CASP10Q92851 521 aa22.35■■□□□ 1.17
PRKCSH-216ENST00000592445 MAP4K1Q92918 833 aa22.35■■□□□ 1.17
PRKCSH-216ENST00000592445 TMEM87BQ96K49 555 aa22.35■■□□□ 1.17
PRKCSH-216ENST00000592445 TMEM117Q9H0C3 514 aa22.35■■□□□ 1.17
PRKCSH-216ENST00000592445 SORCS3Q9UPU3 1222 aa22.35■■□□□ 1.17
PRKCSH-216ENST00000592445 RBM8AQ9Y5S9 174 aaKnown RBP22.35■■□□□ 1.17
PRKCSH-216ENST00000592445 COL1A2P08123 1366 aa22.35■■□□□ 1.17
PRKCSH-216ENST00000592445 IGKV6D-21A0A0A0MT36 114 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 HOXA2O43364 376 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 CCNE2O96020 404 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 PPM1AP35813 382 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 ZNF76P36508 570 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 PDXDC2PQ6P474 469 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 KCNT2Q6UVM3 1135 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 TMTC3Q6ZXV5 915 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 FAM228AQ86W67 206 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 CKAP2LQ8IYA6 745 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 ABI1Q8IZP0 508 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 FANCBQ8NB91 859 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 ZNF558Q96NG5 402 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 ZNF302Q9NR11 478 aa22.34■■□□□ 1.17
PRKCSH-216ENST00000592445 PROB1E7EW31 1015 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 FOSP01100 380 aaPredicted RBP22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 PBX3P40426 434 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 NAPAP54920 295 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 FOXK2Q01167 660 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 ABHD15Q6UXT9 468 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 LRRC55Q6ZSA7 311 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 LRRC43Q8N309 656 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 METTL13Q8N6R0 699 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 EXOC6Q8TAG9 804 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 NECTIN4Q96NY8 510 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 RIC8AQ9NPQ8 531 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 CDH22Q9UJ99 828 aa22.33■■□□□ 1.17
PRKCSH-216ENST00000592445 MEIS1O00470 390 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 BRD1O95696 1058 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 VTNP04004 478 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 CA8P35219 290 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 LIFRP42702 1097 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 WWC2Q6AWC2 1192 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 SWSAP1Q6NVH7 229 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 MIS18BP1Q6P0N0 1132 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 ASCL5Q7RTU5 278 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 CCDC60Q8IWA6 550 aaPredicted RBP22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 CASD1Q96PB1 797 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 ANO3Q9BYT9 981 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 SPG21Q9NZD8 308 aa22.32■■□□□ 1.16
PRKCSH-216ENST00000592445 C2CD4DB7Z1M9 353 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 ADCY7P51828 1080 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 ITIH3Q06033 890 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 DSC3Q14574 896 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 SMC1AQ14683 1233 aaKnown RBP22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 TRMT1LQ7Z2T5 733 aaKnown RBP22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 MICU3Q86XE3 530 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 TMEM105Q8N8V8 129 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 RNF169Q8NCN4 708 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 ADAM7Q9H2U9 754 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 POMKQ9H5K3 350 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 HCFC2Q9Y5Z7 792 aa22.31■■□□□ 1.16
PRKCSH-216ENST00000592445 ZBTB42B2RXF5 422 aa22.3■■□□□ 1.16
PRKCSH-216ENST00000592445 GPR32O75388 356 aa22.3■■□□□ 1.16
PRKCSH-216ENST00000592445 C22orf31O95567 290 aa22.3■■□□□ 1.16
PRKCSH-216ENST00000592445 ZSCAN20P17040 1043 aaPredicted RBP22.3■■□□□ 1.16
PRKCSH-216ENST00000592445 SYNE3Q6ZMZ3 975 aa22.3■■□□□ 1.16
PRKCSH-216ENST00000592445 MRPL43Q8N983 215 aaKnown RBP22.3■■□□□ 1.16
PRKCSH-216ENST00000592445 LRRC2Q9BYS8 371 aa22.3■■□□□ 1.16
PRKCSH-216ENST00000592445 MFSD1Q9H3U5 465 aa22.3■■□□□ 1.16
PRKCSH-216ENST00000592445 PTPRZ1P23471 2315 aaPredicted RBP22.29■■□□□ 1.16
PRKCSH-216ENST00000592445 MTHFRP42898 656 aa22.29■■□□□ 1.16
PRKCSH-216ENST00000592445 BMS1Q14692 1282 aaKnown RBP22.29■■□□□ 1.16
PRKCSH-216ENST00000592445 TYW1BQ6NUM6 668 aa22.29■■□□□ 1.16
PRKCSH-216ENST00000592445 PPP1R18Q6NYC8 613 aa22.29■■□□□ 1.16
PRKCSH-216ENST00000592445 TEX2Q8IWB9 1127 aa22.29■■□□□ 1.16
PRKCSH-216ENST00000592445 BBXQ8WY36 941 aaPredicted RBP22.29■■□□□ 1.16
PRKCSH-216ENST00000592445 RNF19AQ9NV58 838 aa22.29■■□□□ 1.16
PRKCSH-216ENST00000592445 PLXNA3P51805 1871 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 PRR23AA6NEV1 266 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 C2orf71A6NGG8 1288 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 ATP4AP20648 1035 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 SREBF1P36956 1147 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 NBL1P41271 181 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 ASTLQ6HA08 431 aaPredicted RBP22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 NIPA1Q7RTP0 329 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 PLA2G4DQ86XP0 818 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 TMEM87AQ8NBN3 555 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 SMOC2Q9H3U7 446 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 TCEAL9Q9UHQ7 104 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 AKT3Q9Y243 479 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 DMDP11532 3685 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 SPTBN4Q9H254 2564 aa22.28■■□□□ 1.16
PRKCSH-216ENST00000592445 SMCO2A6NFE2 343 aa22.27■■□□□ 1.16
PRKCSH-216ENST00000592445 CLASP2O75122 1294 aaKnown RBP22.27■■□□□ 1.16
PRKCSH-216ENST00000592445 ASGR2P07307 311 aa22.27■■□□□ 1.16
PRKCSH-216ENST00000592445 WEE2P0C1S8 567 aa22.27■■□□□ 1.16
PRKCSH-216ENST00000592445 CLCN3P51790 818 aa22.27■■□□□ 1.16
PRKCSH-216ENST00000592445 NLRP11P59045 1033 aaKnown RBP22.27■■□□□ 1.16
PRKCSH-216ENST00000592445 AP3B2Q13367 1082 aa22.27■■□□□ 1.16
PRKCSH-216ENST00000592445 COL9A3Q14050 684 aaPredicted RBP22.27■■□□□ 1.16
PRKCSH-216ENST00000592445 RARS2Q5T160 578 aaKnown RBP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms