RNA–Protein interactions for RNA: ENST00000592076.5

TMC6-222, Transcript of transmembrane channel like 6, human

TSL 3

Gene TMC6, Length 693 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-222	ENST00000592076	NLRP11	P59045	1033 aa	Known RBP	18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	CYP4A11	Q02928	519 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	OTUD6A	Q7L8S5	288 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	NOSTRIN	Q8IVI9	506 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	EXOC8	Q8IYI6	725 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	NEK9	Q8TD19	979 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	CEP170P1	Q96L14	293 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	ZSWIM4	Q9H7M6	989 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	RNF216	Q9NWF9	866 aa	Predicted RBP	18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	MTUS1	Q9ULD2	1270 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	LRFN2	Q9ULH4	789 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	SMC3	Q9UQE7	1217 aa		18.21	■□□□□ 0.51
TMC6-222	ENST00000592076	DENND3	A2RUS2	1198 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	LINC01553	A4QN01	128 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	TMEM150B	A6NC51	233 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076		H3BQV1	296 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	RBAK-RBAKDN	I3L0D1	243 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	ENPP3	O14638	875 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	STAG3L1	P0CL83	205 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	IBSP	P21815	317 aa	Predicted RBP	18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	TRAPPC10	P48553	1259 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	POLG	P54098	1239 aa	Predicted RBP	18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	HTRA4	P83105	476 aa	Predicted RBP	18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	CDC42EP1	Q00587	391 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	TARBP2	Q15633	366 aa	Known RBP	18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	TTC38	Q5R3I4	469 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	PLA2G4F	Q68DD2	849 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	MCTP1	Q6DN14	999 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	TPH2	Q8IWU9	490 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	C4orf19	Q8IY42	314 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	MICALL1	Q8N3F8	863 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	NLRP7	Q8WX94	980 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	SLC7A3	Q8WY07	619 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	PPM1E	Q8WY54	764 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	DYDC2	Q96IM9	177 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	SH2D3A	Q9BRG2	576 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	NOC2L	Q9Y3T9	749 aa	Known RBP	18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	PPME1	Q9Y570	386 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	GTF3C3	Q9Y5Q9	886 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	TTC3	P53804	2025 aa		18.2	■□□□□ 0.5
TMC6-222	ENST00000592076	CDH23	Q9H251	3354 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	ARHGEF15	O94989	841 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	OR52Z1	P0C646	297 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	YWHAB	P31946	246 aa	Known RBP	18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	SPIRE1	Q08AE8	756 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	CTTN	Q14247	550 aa	Known RBP	18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	ZNF174	Q15697	407 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	ANO5	Q75V66	913 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	LINC01465	Q8N7H1	131 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	SAMD11	Q96NU1	681 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	BACH2	Q9BYV9	841 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	TSPYL2	Q9H2G4	693 aa	Predicted RBP	18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	ERVK-5	Q9HDB9	667 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	CYP26B1	Q9NR63	512 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	RGL1	Q9NZL6	768 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	ST3GAL5	Q9UNP4	418 aa		18.19	■□□□□ 0.5
TMC6-222	ENST00000592076	GPR32	O75388	356 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	MAF	O75444	373 aa	Predicted RBP	18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	CD2BP2	O95400	341 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	GJB2	P29033	226 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	RFC5	P40937	340 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	GPC3	P51654	580 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	ERVK-21	P61565	698 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	ADGRE1	Q14246	886 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	XKR9	Q5GH70	373 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	FAM228A	Q86W67	206 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	NPAS4	Q8IUM7	802 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	SP7	Q8TDD2	431 aa	Predicted RBP	18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	TMEM40	Q8WWA1	233 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	CDHR5	Q9HBB8	845 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	C1orf112	Q9NSG2	853 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	SUCLA2	Q9P2R7	463 aa	Predicted RBP	18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	ADGRA3	Q8IWK6	1321 aa		18.18	■□□□□ 0.5
TMC6-222	ENST00000592076	RFXAP	O00287	272 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	WNT7A	O00755	349 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	STBD1	O95210	358 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	ZSCAN20	P17040	1043 aa	Predicted RBP	18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	EIF4B	P23588	611 aa	Known RBP	18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	RHPN2	Q8IUC4	686 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	FIBCD1	Q8N539	461 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	FBXO22	Q8NEZ5	403 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	ERMN	Q8TAM6	284 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	LINC01599	Q8WXQ3	324 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	ZNF668	Q96K58	619 aa	Predicted RBP	18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	MTMR9	Q96QG7	549 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	ADAM2	Q99965	735 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	GCOM2	Q9BZD3	368 aa	Predicted RBP	18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	TMEM60	Q9H2L4	133 aa		18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	COL4A4	P53420	1690 aa	Predicted RBP	18.17	■□□□□ 0.5
TMC6-222	ENST00000592076	ARID2	Q68CP9	1835 aa		18.16	■□□□□ 0.5
TMC6-222	ENST00000592076	COL6A3	P12111	3177 aa		18.16	■□□□□ 0.5
TMC6-222	ENST00000592076	NLRC5	Q86WI3	1866 aa		18.16	■□□□□ 0.5
TMC6-222	ENST00000592076	COL4A6	Q14031	1691 aa		18.16	■□□□□ 0.5
TMC6-222	ENST00000592076	POTEM	A6NI47	508 aa		18.16	■□□□□ 0.5
TMC6-222	ENST00000592076	GAS2	O43903	313 aa	Known RBP	18.16	■□□□□ 0.5
TMC6-222	ENST00000592076	U2AF2	P26368	475 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
TMC6-222	ENST00000592076	NPEPPS	P55786	919 aa		18.16	■□□□□ 0.5
TMC6-222	ENST00000592076	BTG3	Q14201	252 aa	Predicted RBP	18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 86 ms