RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 LCORLQ8N3X6 602 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 CRACR2BQ8N4Y2 399 aaPredicted RBP9.01□□□□□ -0.97
VMP1-213ENST00000591877 ANKRD13CQ8N6S4 541 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 SHKBP1Q8TBC3 707 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 TMEM40Q8WWA1 233 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 KCNB2Q92953 911 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 HAUS7Q99871 368 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 LRRCC1Q9C099 1032 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 ASCC2Q9H1I8 757 aaPredicted RBP9.01□□□□□ -0.97
VMP1-213ENST00000591877 DCTPP1Q9H773 170 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 PAG1Q9NWQ8 432 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 PRKAB1Q9Y478 270 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 MYPNQ86TC9 1320 aa9.01□□□□□ -0.97
VMP1-213ENST00000591877 PRKAB2O43741 272 aa9□□□□□ -0.97
VMP1-213ENST00000591877 PEX10O60683 326 aa9□□□□□ -0.97
VMP1-213ENST00000591877 HTR3BO95264 441 aa9□□□□□ -0.97
VMP1-213ENST00000591877 GH2P01242 217 aa9□□□□□ -0.97
VMP1-213ENST00000591877 GUCY2CP25092 1073 aa9□□□□□ -0.97
VMP1-213ENST00000591877 GUCY1A2P33402 732 aa9□□□□□ -0.97
VMP1-213ENST00000591877 SHMT1P34896 483 aa9□□□□□ -0.97
VMP1-213ENST00000591877 GABPAQ06546 454 aa9□□□□□ -0.97
VMP1-213ENST00000591877 POU4F3Q15319 338 aa9□□□□□ -0.97
VMP1-213ENST00000591877 WIPI1Q5MNZ9 446 aaPredicted RBP9□□□□□ -0.97
VMP1-213ENST00000591877 PDZRN4Q6ZMN7 1036 aaPredicted RBP9□□□□□ -0.97
VMP1-213ENST00000591877 ABI1Q8IZP0 508 aa9□□□□□ -0.97
VMP1-213ENST00000591877 GPBAR1Q8TDU6 330 aa9□□□□□ -0.97
VMP1-213ENST00000591877 SMCR8Q8TEV9 937 aaPredicted RBP9□□□□□ -0.97
VMP1-213ENST00000591877 SDR42E1Q8WUS8 393 aa9□□□□□ -0.97
VMP1-213ENST00000591877 DNAJC7Q99615 494 aa9□□□□□ -0.97
VMP1-213ENST00000591877 TNKS2Q9H2K2 1166 aa9□□□□□ -0.97
VMP1-213ENST00000591877 ARMT1Q9H993 441 aa9□□□□□ -0.97
VMP1-213ENST00000591877 AS3MTQ9HBK9 375 aa9□□□□□ -0.97
VMP1-213ENST00000591877 DCP1AQ9NPI6 582 aaPredicted RBP9□□□□□ -0.97
VMP1-213ENST00000591877 KCNK4Q9NYG8 393 aa9□□□□□ -0.97
VMP1-213ENST00000591877 SERPINB13Q9UIV8 391 aa9□□□□□ -0.97
VMP1-213ENST00000591877 PCDHA4Q9UN74 947 aa9□□□□□ -0.97
VMP1-213ENST00000591877 RLFQ13129 1914 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 MKI67P46013 3256 aaKnown RBP8.99□□□□□ -0.97
VMP1-213ENST00000591877 C19orf81C9J6K1 198 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 SMIM22K7EJ46 135 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 CDC45O75419 566 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 CYP2D6P10635 497 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 HOXD10P28358 340 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 HOXA7P31268 230 aaPredicted RBP8.99□□□□□ -0.97
VMP1-213ENST00000591877 GRK4P32298 578 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 CHMP4BP1P59074 171 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 PTPROQ16827 1216 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 FAM110CQ1W6H9 321 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 ARSHQ5FYA8 562 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 TXNDC11Q6PKC3 985 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 TTC6Q86TZ1 520 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 HOMER1Q86YM7 354 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 KLHL23Q8NBE8 558 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 ST13P5Q8NFI4 369 aaPredicted RBP8.99□□□□□ -0.97
VMP1-213ENST00000591877 RAET1EQ8TD07 263 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 FAM46AQ96IP4 442 aaKnown RBP8.99□□□□□ -0.97
VMP1-213ENST00000591877 P2RX7Q99572 595 aaKnown RBP8.99□□□□□ -0.97
VMP1-213ENST00000591877 CRNKL1Q9BZJ0 848 aaKnown RBP8.99□□□□□ -0.97
VMP1-213ENST00000591877 GMIPQ9P107 970 aa8.99□□□□□ -0.97
VMP1-213ENST00000591877 FSCN2O14926 492 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 MBD4O95243 580 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 GCLCP48506 637 aaPredicted RBP8.98□□□□□ -0.97
VMP1-213ENST00000591877 FLT3LGP49771 235 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 RRP1P56182 461 aaKnown RBP8.98□□□□□ -0.97
VMP1-213ENST00000591877 PDE4BQ07343 736 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 PABPC4Q13310 644 aaKnown RBP eCLIP8.98□□□□□ -0.97
VMP1-213ENST00000591877 UVSSAQ2YD98 709 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 CERKLQ49MI3 558 aaPredicted RBP8.98□□□□□ -0.97
VMP1-213ENST00000591877 TSHZ3Q63HK5 1081 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 LARP1BQ659C4 914 aaKnown RBP8.98□□□□□ -0.97
VMP1-213ENST00000591877 SLC44A5Q8NCS7 719 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 ACER1Q8TDN7 264 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 SLC7A3Q8WY07 619 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 APPBP2Q92624 585 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 SHISA4Q96DD7 197 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 MYRFLQ96LU7 910 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 PUS7LQ9H0K6 701 aaKnown RBP8.98□□□□□ -0.97
VMP1-213ENST00000591877 SLKQ9H2G2 1235 aaPredicted RBP8.98□□□□□ -0.97
VMP1-213ENST00000591877 TXNRD2Q9NNW7 524 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 ST7Q9NRC1 585 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 ECHDC1Q9NTX5 307 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 MCM9Q9NXL9 1143 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 MORF4L1Q9UBU8 362 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 SYNGAP1Q96PV0 1343 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 PARP14Q460N5 1801 aa8.98□□□□□ -0.97
VMP1-213ENST00000591877 CYP2D7A0A087X1C5 515 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 A0A1W2PQH9 124 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 TNPO2O14787 897 aaKnown RBP8.97□□□□□ -0.97
VMP1-213ENST00000591877 ADCY3O60266 1144 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 C8AP07357 584 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 CCL5P13501 91 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 CD68P34810 354 aaPredicted RBP8.97□□□□□ -0.97
VMP1-213ENST00000591877 HERVK_113P62684 666 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 SEPT2Q15019 361 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 UBE3CQ15386 1083 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 ZYXQ15942 572 aaKnown RBP8.97□□□□□ -0.97
VMP1-213ENST00000591877 ABCB5Q2M3G0 1257 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 C2orf27AQ580R0 203 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 TMEM201Q5SNT2 666 aa8.97□□□□□ -0.97
VMP1-213ENST00000591877 CYFIP1Q7L576 1253 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms