RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	ZBED2	Q9BTP6	218 aa		10.31	□□□□□ -0.76
DNMT1-223	ENST00000591239	SUGCT	Q9HAC7	445 aa		10.31	□□□□□ -0.76
DNMT1-223	ENST00000591239	CDHR5	Q9HBB8	845 aa		10.31	□□□□□ -0.76
DNMT1-223	ENST00000591239	WRAP73	Q9P2S5	460 aa	Predicted RBP	10.31	□□□□□ -0.76
DNMT1-223	ENST00000591239	NOL7	Q9UMY1	257 aa	Known RBP	10.31	□□□□□ -0.76
DNMT1-223	ENST00000591239	AKT3	Q9Y243	479 aa		10.31	□□□□□ -0.76
DNMT1-223	ENST00000591239	GINS2	Q9Y248	185 aa		10.31	□□□□□ -0.76
DNMT1-223	ENST00000591239	SI	P14410	1827 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	GBF1	Q92538	1859 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	GPR32	O75388	356 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	SLITRK3	O94933	977 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	AMH	P03971	560 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	CA3	P07451	260 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	TOB1	P50616	345 aa	Predicted RBP	10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	CRYBB1	P53674	252 aa	Predicted RBP	10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	CYP4A11	Q02928	519 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	CTTN	Q14247	550 aa	Known RBP	10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	NBR1	Q14596	966 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	GRIN2C	Q14957	1233 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	LARP1B	Q659C4	914 aa	Known RBP	10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	PPP2R2D	Q66LE6	453 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	PLA2G4F	Q68DD2	849 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	FAM117B	Q6P1L5	589 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	TPH2	Q8IWU9	490 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	C4orf19	Q8IY42	314 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	MYOCD	Q8IZQ8	938 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	TOP1MT	Q969P6	601 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	MAP7D2	Q96T17	732 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	PPP1R16B	Q96T49	567 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	RAD9A	Q99638	391 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	HSD17B14	Q9BPX1	270 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	ZSWIM4	Q9H7M6	989 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	CYP26B1	Q9NR63	512 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	PADI3	Q9ULW8	664 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	STXBP5L	Q9Y2K9	1186 aa		10.3	□□□□□ -0.76
DNMT1-223	ENST00000591239	MICAL3	Q7RTP6	2002 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	PTPRS	Q13332	1948 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	IGKV6-21	A0A0C4DH24	114 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	POTEM	A6NI47	508 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	ENPP3	O14638	875 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	ZBTB39	O15060	712 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	MAF	O75444	373 aa	Predicted RBP	10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	RPS6KA5	O75582	802 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	OR52Z1	P0C646	297 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	YWHAB	P31946	246 aa	Known RBP	10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	TEC	P42680	631 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	DNM2	P50570	870 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	NPEPPS	P55786	919 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	NLRP11	P59045	1033 aa	Known RBP	10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	PAK2	Q13177	524 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	TMEM266	Q2M3C6	531 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	OTUD6A	Q7L8S5	288 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	ZNF710	Q8N1W2	664 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	C4orf32	Q8N8J7	132 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	ZNF579	Q8NAF0	562 aa	Known RBP	10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	NEK9	Q8TD19	979 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	TMEM40	Q8WWA1	233 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	MYLIP	Q8WY64	445 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	SPOCK2	Q92563	424 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	CEP170P1	Q96L14	293 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	OSMR	Q99650	979 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	FTHL17	Q9BXU8	183 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	ADAMTS10	Q9H324	1103 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	NOC2L	Q9Y3T9	749 aa	Known RBP	10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	INSL6	Q9Y581	213 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	PCDHB6	Q9Y5E3	794 aa		10.29	□□□□□ -0.76
DNMT1-223	ENST00000591239	LCHN	A4D1U4	455 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	ARHGEF15	O94989	841 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	UPP2	O95045	317 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	LYPLA2	O95372	231 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	GPC3	P51654	580 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	TAP1	Q03518	808 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	NFX1	Q12986	1120 aa	Known RBP	10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	PTGDR	Q13258	359 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	DRP2	Q13474	957 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	XKR9	Q5GH70	373 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	ODR4	Q5SWX8	454 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	EXOC8	Q8IYI6	725 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	SLC7A3	Q8WY07	619 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	JPH2	Q9BR39	696 aa	Predicted RBP	10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	TMX1	Q9H3N1	280 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	PRDM12	Q9H4Q4	367 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	DHX33	Q9H6R0	707 aa	Known RBP	10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	ERVK-5	Q9HDB9	667 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	ST3GAL5	Q9UNP4	418 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	PPME1	Q9Y570	386 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	LOXHD1	Q8IVV2	1947 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	XIRP2	A4UGR9	3374 aa		10.28	□□□□□ -0.76
DNMT1-223	ENST00000591239	MYO9B	Q13459	2157 aa		10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239		K7ELQ4	463 aa	Predicted RBP	10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239	GPR182	O15218	404 aa		10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239	SPATA31C1	P0DKV0	1188 aa		10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239	FOSL2	P15408	326 aa		10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239	PDC	P20941	246 aa		10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239	EIF4B	P23588	611 aa	Known RBP	10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239	FXR2	P51116	673 aa	Known RBP eCLIP	10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239	POLG	P54098	1239 aa	Predicted RBP	10.27	□□□□□ -0.77
DNMT1-223	ENST00000591239	HTRA4	P83105	476 aa	Predicted RBP	10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms