RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 DNM2P50570 870 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 CTTNQ14247 550 aaKnown RBP13.55□□□□□ -0.24
TPM4-212ENST00000590180 TARBP2Q15633 366 aaKnown RBP13.55□□□□□ -0.24
TPM4-212ENST00000590180 SPRED2Q7Z698 418 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 TPH2Q8IWU9 490 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 MICALL1Q8N3F8 863 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 DYDC2Q96IM9 177 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 SCLT1Q96NL6 688 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 TGS1Q96RS0 853 aaKnown RBP13.55□□□□□ -0.24
TPM4-212ENST00000590180 FOXP1Q9H334 677 aaPredicted RBP13.55□□□□□ -0.24
TPM4-212ENST00000590180 TTC12Q9H892 705 aaPredicted RBP13.55□□□□□ -0.24
TPM4-212ENST00000590180 RGL1Q9NZL6 768 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 KIF3AQ9Y496 699 aa13.55□□□□□ -0.24
TPM4-212ENST00000590180 LINC01553A4QN01 128 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 EPOPA6NHQ4 379 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 WNT7AO00755 349 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 GPR32O75388 356 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 CD2BP2O95400 341 aaKnown RBP13.54□□□□□ -0.24
TPM4-212ENST00000590180 NPEPPSP55786 919 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 HTRA4P83105 476 aaPredicted RBP13.54□□□□□ -0.24
TPM4-212ENST00000590180 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 PLA2G4FQ68DD2 849 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 ANO5Q75V66 913 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 OTUD6AQ7L8S5 288 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 TMEM40Q8WWA1 233 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 CEP170P1Q96L14 293 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 ZSWIM4Q9H7M6 989 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 ERVK-5Q9HDB9 667 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 LRFN2Q9ULH4 789 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 GBF1Q92538 1859 aa13.54□□□□□ -0.24
TPM4-212ENST00000590180 DENND3A2RUS2 1198 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 SLITRK3O94933 977 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 STAG3L1P0CL83 205 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 ERVK-21P61565 698 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 CDC42EP1Q00587 391 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 TTC38Q5R3I4 469 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 MCTP1Q6DN14 999 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 NOSTRINQ8IVI9 506 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 ZNF710Q8N1W2 664 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 FIBCD1Q8N539 461 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 LINC01465Q8N7H1 131 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 NLRP7Q8WX94 980 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 MTMR9Q96QG7 549 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 ADAM2Q99965 735 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 EIF2AK1Q9BQI3 630 aaKnown RBP13.53□□□□□ -0.24
TPM4-212ENST00000590180 JPH2Q9BR39 696 aaPredicted RBP13.53□□□□□ -0.24
TPM4-212ENST00000590180 LXNQ9BS40 222 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 BACH2Q9BYV9 841 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 TMEM60Q9H2L4 133 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 ADAMTS10Q9H324 1103 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 TMX1Q9H3N1 280 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 CYP26B1Q9NR63 512 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 SUCLA2Q9P2R7 463 aaPredicted RBP13.53□□□□□ -0.24
TPM4-212ENST00000590180 NOL7Q9UMY1 257 aaKnown RBP13.53□□□□□ -0.24
TPM4-212ENST00000590180 GTF3C3Q9Y5Q9 886 aa13.53□□□□□ -0.24
TPM4-212ENST00000590180 H3BQV1 296 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 MAFO75444 373 aaPredicted RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 EIF4BP23588 611 aaKnown RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 YWHABP31946 246 aaKnown RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 TECP42680 631 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 GPC3P51654 580 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 SPIRE1Q08AE8 756 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 GRB10Q13322 594 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 DRP2Q13474 957 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 XKR9Q5GH70 373 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 FAM228AQ86W67 206 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 RHPN2Q8IUC4 686 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.52□□□□□ -0.25
TPM4-212ENST00000590180 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 FBXO22Q8NEZ5 403 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 SP7Q8TDD2 431 aaPredicted RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 LINC01599Q8WXQ3 324 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 CEP89Q96ST8 783 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 C17orf80Q9BSJ5 609 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 GCOM2Q9BZD3 368 aaPredicted RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 TSPYL2Q9H2G4 693 aaPredicted RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 WRAP73Q9P2S5 460 aaPredicted RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 SMC3Q9UQE7 1217 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 PCDHB7Q9Y5E2 793 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 MICAL3Q7RTP6 2002 aa13.52□□□□□ -0.25
TPM4-212ENST00000590180 PRRC2BQ5JSZ5 2229 aaKnown RBP13.52□□□□□ -0.25
TPM4-212ENST00000590180 A0A087WWV3 80 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 IGKV6-21A0A0C4DH24 114 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 ZBTB39O15060 712 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 MGEA5O60502 916 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 ZSCAN20P17040 1043 aaPredicted RBP13.51□□□□□ -0.25
TPM4-212ENST00000590180 GJB2P29033 226 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 POLGP54098 1239 aaPredicted RBP13.51□□□□□ -0.25
TPM4-212ENST00000590180 BTG3Q14201 252 aaPredicted RBP13.51□□□□□ -0.25
TPM4-212ENST00000590180 SKIV2LQ15477 1246 aaKnown RBP13.51□□□□□ -0.25
TPM4-212ENST00000590180 FAM43BQ6ZT52 329 aaPredicted RBP13.51□□□□□ -0.25
TPM4-212ENST00000590180 NPAS4Q8IUM7 802 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 TMEM192Q8IY95 271 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 EXOC8Q8IYI6 725 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 GDPD5Q8WTR4 605 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 SLC7A3Q8WY07 619 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 TMEM143Q96AN5 459 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 HSD17B14Q9BPX1 270 aa13.51□□□□□ -0.25
TPM4-212ENST00000590180 RGS18Q9NS28 235 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms