RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 LOXHD1Q8IVV2 1947 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 PTPRZ1P23471 2315 aaPredicted RBP9.38□□□□□ -0.91
TPM4-211ENST00000589897 SIP14410 1827 aa9.38□□□□□ -0.91
TPM4-211ENST00000589897 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.37□□□□□ -0.91
TPM4-211ENST00000589897 ENPP3O14638 875 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 MSH4O15457 936 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 MAGEB2O15479 319 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 MBTPS2O43462 519 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 STAG3L1P0CL83 205 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 SFNP31947 248 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 JAK3P52333 1124 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 SIGLEC14Q08ET2 396 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 SCRN1Q12765 414 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 SMAD4Q13485 552 aaKnown RBP9.37□□□□□ -0.91
TPM4-211ENST00000589897 MIER3Q7Z3K6 550 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 KRT25Q7Z3Z0 450 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 SCLT1Q96NL6 688 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 MAP7D2Q96T17 732 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 RIT2Q99578 217 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 C17orf80Q9BSJ5 609 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 PADI3Q9ULW8 664 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 KCNJ14Q9UNX9 436 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 AKT3Q9Y243 479 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 RWDD3Q9Y3V2 267 aa9.37□□□□□ -0.91
TPM4-211ENST00000589897 MAFBQ9Y5Q3 323 aaPredicted RBP9.37□□□□□ -0.91
TPM4-211ENST00000589897 DENND3A2RUS2 1198 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 H0Y858 1186 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 RBAK-RBAKDNI3L0D1 243 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 GPR182O15218 404 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 PFKFB2O60825 505 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 RPS6KA5O75582 802 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 CTNNB1P35222 781 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 NEK4P51957 841 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 AK2P54819 239 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 TRIM29Q14134 588 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 BTG3Q14201 252 aaPredicted RBP9.36□□□□□ -0.91
TPM4-211ENST00000589897 INF2Q27J81 1249 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 TMEM266Q2M3C6 531 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 CTC1Q2NKJ3 1217 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 Q4G0T1 1027 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 ASCL5Q7RTU5 278 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 TMEM192Q8IY95 271 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 SP7Q8TDD2 431 aaPredicted RBP9.36□□□□□ -0.91
TPM4-211ENST00000589897 SLC5A5Q92911 643 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 AIFM3Q96NN9 605 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 PPP1R16BQ96T49 567 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 NAP1L4Q99733 375 aaKnown RBP9.36□□□□□ -0.91
TPM4-211ENST00000589897 AGO3Q9H9G7 860 aaKnown RBP9.36□□□□□ -0.91
TPM4-211ENST00000589897 TLR9Q9NR96 1032 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 ORC3Q9UBD5 711 aaPredicted RBP9.36□□□□□ -0.91
TPM4-211ENST00000589897 DDX25Q9UHL0 483 aaKnown RBP9.36□□□□□ -0.91
TPM4-211ENST00000589897 CD207Q9UJ71 328 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 TPCN1Q9ULQ1 816 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 TRANK1O15050 2925 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 NLRC5Q86WI3 1866 aa9.36□□□□□ -0.91
TPM4-211ENST00000589897 COL4A4P53420 1690 aaPredicted RBP9.36□□□□□ -0.91
TPM4-211ENST00000589897 STK36Q9NRP7 1315 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 IGSF9BQ9UPX0 1349 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 WDR81Q562E7 1941 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 CCNT1O60563 726 aaKnown RBP9.35□□□□□ -0.91
TPM4-211ENST00000589897 TDP2O95551 362 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 VTNP04004 478 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 OATP04181 439 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 RB1P06400 928 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 LTBRP36941 435 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 NBL1P41271 181 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 CRYBB1P53674 252 aaPredicted RBP9.35□□□□□ -0.91
TPM4-211ENST00000589897 PRKCEQ02156 737 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 TBC1D8BQ0IIM8 1120 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
TPM4-211ENST00000589897 KIZQ2M2Z5 673 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 SPOUT1Q5T280 376 aaKnown RBP9.35□□□□□ -0.91
TPM4-211ENST00000589897 EFCAB12Q6NXP0 572 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 MOXD1Q6UVY6 613 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 FAM43BQ6ZT52 329 aaPredicted RBP9.35□□□□□ -0.91
TPM4-211ENST00000589897 NEK8Q86SG6 692 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 NPAS4Q8IUM7 802 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 KIAA0319LQ8IZA0 1049 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 ZNF710Q8N1W2 664 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 RDM1Q8NG50 284 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 NKD2Q969F2 451 aaPredicted RBP9.35□□□□□ -0.91
TPM4-211ENST00000589897 PPP2R3CQ969Q6 453 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 LENG9Q96B70 501 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 C11orf84Q9BUA3 381 aaPredicted RBP9.35□□□□□ -0.91
TPM4-211ENST00000589897 LMAN2LQ9H0V9 348 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 UNC45AQ9H3U1 944 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 SEPT9Q9UHD8 586 aaPredicted RBP9.35□□□□□ -0.91
TPM4-211ENST00000589897 PCDHB7Q9Y5E2 793 aa9.35□□□□□ -0.91
TPM4-211ENST00000589897 TTC3P53804 2025 aa9.34□□□□□ -0.91
TPM4-211ENST00000589897 ADGRA3Q8IWK6 1321 aa9.34□□□□□ -0.91
TPM4-211ENST00000589897 KDM3AQ9Y4C1 1321 aa9.34□□□□□ -0.91
TPM4-211ENST00000589897 CYP3A7-CYP3A51PA0A087WV96 503 aa9.34□□□□□ -0.91
TPM4-211ENST00000589897 PRR23AA6NEV1 266 aa9.34□□□□□ -0.91
TPM4-211ENST00000589897 DDX11L8A8MPP1 907 aa9.34□□□□□ -0.91
TPM4-211ENST00000589897 GALR2O43603 387 aaPredicted RBP9.34□□□□□ -0.91
TPM4-211ENST00000589897 DKC1O60832 514 aaKnown RBP eCLIP9.34□□□□□ -0.91
TPM4-211ENST00000589897 BAG4O95429 457 aaKnown RBP9.34□□□□□ -0.91
TPM4-211ENST00000589897 C22orf31O95567 290 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms