RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 C2CD4AQ8NCU7 369 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-219ENST00000589349 DIS3LQ8TF46 1054 aaKnown RBP9.69□□□□□ -0.86
DNMT1-219ENST00000589349 CBX8Q9HC52 389 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 PAK6Q9NQU5 681 aaPredicted RBP9.69□□□□□ -0.86
DNMT1-219ENST00000589349 HOMER2Q9NSB8 354 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 NYAP2Q9P242 653 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 AP4E1Q9UPM8 1137 aa9.69□□□□□ -0.86
DNMT1-219ENST00000589349 MYH7P12883 1935 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 A0A0D9SFI3 127 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 VWA5AO00534 786 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 SORBS3O60504 671 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 PGK2P07205 417 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 FSTP19883 344 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 SDSP20132 328 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 MCCP23508 829 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 SLC1A4P43007 532 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 TMEM132BQ14DG7 1078 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 LRRC14Q15048 493 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 SNRNP48Q6IEG0 339 aaKnown RBP9.68□□□□□ -0.86
DNMT1-219ENST00000589349 BEND4Q6ZU67 534 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 C7orf61Q8IZ16 206 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 PRPF38AQ8NAV1 312 aaKnown RBP9.68□□□□□ -0.86
DNMT1-219ENST00000589349 NPLOC4Q8TAT6 608 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 FAM83CQ9BQN1 747 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 C11orf49Q9H6J7 331 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 RAVER2Q9HCJ3 691 aaKnown RBP9.68□□□□□ -0.86
DNMT1-219ENST00000589349 MTMR4Q9NYA4 1195 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 FLRT1Q9NZU1 646 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 FEM1BQ9UK73 627 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 PPP1R9AQ9ULJ8 1098 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 MYH8P13535 1937 aa9.68□□□□□ -0.86
DNMT1-219ENST00000589349 PDE4DIPQ5VU43 2346 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 DOCK3Q8IZD9 2030 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 TMEM232C9JQI7 657 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 NMT2O60551 498 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 LIG1P18858 919 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 MAP4P27816 1152 aaKnown RBP9.67□□□□□ -0.86
DNMT1-219ENST00000589349 GRB14Q14449 540 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 SGO2Q562F6 1265 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 PRAMEF19Q5SWL8 479 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 CCDC174Q6PII3 467 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 MFSD6Q6ZSS7 791 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 DYMQ7RTS9 669 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 SMC5Q8IY18 1101 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 ANKRD35Q8N283 1001 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 SHCBP1Q8NEM2 672 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 STK35Q8TDR2 534 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 C7orf69Q9H7B7 122 aa9.67□□□□□ -0.86
DNMT1-219ENST00000589349 DDX60LQ5H9U9 1706 aaKnown RBP9.67□□□□□ -0.86
DNMT1-219ENST00000589349 CCDC171Q6TFL3 1326 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 HIP1O00291 1037 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 ZNF213O14771 459 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 ZNF862O60290 1169 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 FGAP02671 866 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 CELA3AP09093 270 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 HSPD1P10809 573 aaKnown RBP9.66□□□□□ -0.86
DNMT1-219ENST00000589349 CAPN2P17655 700 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 ITGB7P26010 798 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 COPB2P35606 906 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 SNAP25P60880 206 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 ZNF252P-AS1Q0IIN9 211 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 CCDC85BQ15834 202 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-219ENST00000589349 SCARA3Q6AZY7 606 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 KCTD1Q719H9 257 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 ZNF589Q86UQ0 364 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-219ENST00000589349 RIOX2Q8IUF8 465 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 GIPC2Q8TF65 315 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 CHURC1Q8WUH1 139 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 USP6NLQ92738 828 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 FAM161BQ96MY7 647 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 TEX13BQ9BXU2 312 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 SENP6Q9GZR1 1112 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-219ENST00000589349 DDX20Q9UHI6 824 aaKnown RBP9.66□□□□□ -0.86
DNMT1-219ENST00000589349 ZMYND8Q9ULU4 1186 aaPredicted RBP9.66□□□□□ -0.86
DNMT1-219ENST00000589349 CYP8B1Q9UNU6 501 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 CNPY2Q9Y2B0 182 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 ACTL7BQ9Y614 415 aa9.66□□□□□ -0.86
DNMT1-219ENST00000589349 CENPFP49454 3210 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 ROBO3Q96MS0 1386 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 FRMPD2Q68DX3 1309 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-219ENST00000589349 SALL3Q9BXA9 1300 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-219ENST00000589349 KBTBD13C9JR72 458 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 MSCO60682 206 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 COBLO75128 1261 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 PAGE1O75459 146 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 SYN1P17600 705 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 BMP6P22004 513 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 STAT2P52630 851 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 TAGLNQ01995 201 aaKnown RBP9.65□□□□□ -0.86
DNMT1-219ENST00000589349 ID3Q02535 119 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 GJC2Q5T442 439 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-219ENST00000589349 PCNX4Q63HM2 1172 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 LLGL2Q6P1M3 1020 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 NOL8Q76FK4 1167 aaKnown RBP9.65□□□□□ -0.86
DNMT1-219ENST00000589349 TRIM42Q8IWZ5 723 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 CRELD1Q96HD1 420 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 ATXN3LQ9H3M9 355 aa9.65□□□□□ -0.86
DNMT1-219ENST00000589349 RNF41Q9H4P4 317 aaPredicted RBP9.65□□□□□ -0.86
DNMT1-219ENST00000589349 VTI1BQ9UEU0 232 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms