RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 C22orf31O95567 290 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 STAG3L1P0CL83 205 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 CD52P31358 61 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 HTRA4P83105 476 aaPredicted RBP11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 GRB10Q13322 594 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 PPP4R3AQ6IN85 833 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 TRMT1LQ7Z2T5 733 aaKnown RBP11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 SLFN12Q8IYM2 578 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 GJD3Q8N144 294 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 FBXO22Q8NEZ5 403 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 ETNPPLQ8TBG4 499 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 TOP1MTQ969P6 601 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 ZSCAN31Q96LW9 406 aaPredicted RBP11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 SCLT1Q96NL6 688 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 SH2B1Q9NRF2 756 aaPredicted RBP11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 AKT3Q9Y243 479 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 GINS2Q9Y248 185 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 SPTBN4Q9H254 2564 aa11.92□□□□□ -0.5
CLPTM1-211ENST00000589347 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 SLC37A4O43826 429 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 RPS6KA5O75582 802 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 SEC24BO95487 1268 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 MMP1P03956 469 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 ALADP13716 330 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 ERVK-21P61565 698 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 HMGN5P82970 282 aaKnown RBP11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 TBC1D8BQ0IIM8 1120 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 PPP2R5CQ13362 524 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 XKR3Q5GH77 459 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 NPAS4Q8IUM7 802 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 GDPD5Q8WTR4 605 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 ZBTB10Q96DT7 871 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 JPH2Q9BR39 696 aaPredicted RBP11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 LLPHQ9BRT6 129 aaKnown RBP11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 LMCD1Q9NZU5 365 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 MTUS1Q9ULD2 1270 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 LRFN2Q9ULH4 789 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 PLXNA4Q9HCM2 1894 aa11.91□□□□□ -0.5
CLPTM1-211ENST00000589347 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 DENND3A2RUS2 1198 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 ZBTB42B2RXF5 422 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 GPR182O15218 404 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 ST18O60284 1047 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 ATP4AP20648 1035 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 CLCN3P51790 818 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 FOSBP53539 338 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 CRYBB1P53674 252 aaPredicted RBP11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 PSMC5P62195 406 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 NFX1Q12986 1120 aaKnown RBP11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 GNL2Q13823 731 aaKnown RBP11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 PTPROQ16827 1216 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 LEXMQ3ZCV2 418 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 MTERF2Q49AM1 385 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 CCDC83Q8IWF9 413 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 DIS3L2Q8IYB7 885 aaKnown RBP11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 EXOC8Q8IYI6 725 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 FIBCD1Q8N539 461 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 FAM184AQ8NB25 1140 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 C8orf76Q96K31 380 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 UBE2ZQ9H832 354 aaPredicted RBP11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 KCNMB3Q9NPA1 279 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 C1orf112Q9NSG2 853 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 PADI3Q9ULW8 664 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 KIF3AQ9Y496 699 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 PPME1Q9Y570 386 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 MYH11P35749 1972 aa11.9□□□□□ -0.5
CLPTM1-211ENST00000589347 CACNA1HO95180 2353 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 EDIL3O43854 480 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 ZNF862O60290 1169 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 JAK2O60674 1132 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 VTNP04004 478 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 FDPSP14324 419 aaKnown RBP11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 CTNNB1P35222 781 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 CDC42EP1Q00587 391 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 NR5A1Q13285 461 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 RABEP1Q15276 862 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 CALCRLQ16602 461 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 UGCGQ16739 394 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 TIGD5Q53EQ6 642 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 EFCAB12Q6NXP0 572 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 SPRED2Q7Z698 418 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 KIAA0319LQ8IZA0 1049 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 BANK1Q8NDB2 785 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 OXER1Q8TDS5 423 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 NLRP7Q8WX94 980 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 GJA10Q969M2 543 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 OSMRQ99650 979 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 OSBPL7Q9BZF2 842 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 AGO3Q9H9G7 860 aaKnown RBP11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 DCHS1Q96JQ0 3298 aa11.89□□□□□ -0.51
CLPTM1-211ENST00000589347 TDRD15B5MCY1 1934 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 ENPP3O14638 875 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 DCXO43602 365 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 NEMFO60524 1076 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 QARSP47897 775 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 SARSP49591 514 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 RBM25P49756 843 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms