RNA–Protein interactions for RNA: ENST00000588913.5

DNMT1-215, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 1,775 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-215ENST00000588913 SPATA31C1P0DKV0 1188 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 GNAT1P11488 350 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 NPEPPSP55786 919 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 PPIGQ13427 754 aaKnown RBP eCLIP19.62■□□□□ 0.737e-7■■□□□ 14.4
DNMT1-215ENST00000588913 DRP2Q13474 957 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 ZNF484Q5JVG2 852 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 LINC01465Q8N7H1 131 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 SEPT9Q9UHD8 586 aaPredicted RBP19.62■□□□□ 0.73
DNMT1-215ENST00000588913 PCDHA2Q9Y5H9 948 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.62■□□□□ 0.73
DNMT1-215ENST00000588913 COL1A2P08123 1366 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 CAVIN2O95810 425 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 P4HBP07237 508 aaKnown RBP19.62■□□□□ 0.73
DNMT1-215ENST00000588913 QARSP47897 775 aaKnown RBP19.62■□□□□ 0.73
DNMT1-215ENST00000588913 PSMC5P62195 406 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 ORC2Q13416 577 aaPredicted RBP19.62■□□□□ 0.73
DNMT1-215ENST00000588913 MKRN4PQ13434 485 aaPredicted RBP19.62■□□□□ 0.73
DNMT1-215ENST00000588913 ECM1Q16610 540 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 RILPL1Q5EBL4 403 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 KIAA0319LQ8IZA0 1049 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 LRRC71Q8N4P6 559 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 RETREG2Q8NC44 543 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 FUCA2Q9BTY2 467 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 CDHR5Q9HBB8 845 aa19.62■□□□□ 0.73
DNMT1-215ENST00000588913 GBF1Q92538 1859 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 ADCY5O95622 1261 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 CLCN3P51790 818 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 GRIN1Q05586 938 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 MTERF2Q49AM1 385 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 RASIP1Q5U651 963 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 OTOP2Q7RTS6 562 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 PPP1R16BQ96T49 567 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 NIFKQ9BYG3 293 aaKnown RBP19.61■□□□□ 0.73
DNMT1-215ENST00000588913 CDH23Q9H251 3354 aa19.61■□□□□ 0.73
DNMT1-215ENST00000588913 RSPH10B2B2RC85 870 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 CXCL10P02778 98 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 RSPH10BP0C881 870 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 CDC25AP30304 524 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 ATP2C1P98194 919 aaPredicted RBP19.6■□□□□ 0.73
DNMT1-215ENST00000588913 XKR3Q5GH77 459 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 FAM26DQ5JW98 314 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 TPH2Q8IWU9 490 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 CCDC155Q8N6L0 562 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 CLIC4Q9Y696 253 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 FXR2P51116 673 aaKnown RBP eCLIP19.6■□□□□ 0.731e-6■■■■□ 22.4
DNMT1-215ENST00000588913 TAF2Q6P1X5 1199 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 BRAPQ7Z569 592 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 RPAINQ86UA6 219 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 LRCH3Q96II8 777 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 ZNF668Q96K58 619 aaPredicted RBP19.6■□□□□ 0.73
DNMT1-215ENST00000588913 FAM167AQ96KS9 214 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 BMP2KQ9NSY1 1161 aaPredicted RBP19.6■□□□□ 0.73
DNMT1-215ENST00000588913 CDY2AQ9Y6F7 541 aa19.6■□□□□ 0.73
DNMT1-215ENST00000588913 SMIM35A0A1B0GVV1 85 aa19.59■□□□□ 0.73
DNMT1-215ENST00000588913 CATSPER3Q86XQ3 398 aa19.59■□□□□ 0.73
DNMT1-215ENST00000588913 C4orf19Q8IY42 314 aa19.59■□□□□ 0.73
DNMT1-215ENST00000588913 IGSF22Q8N9C0 903 aa19.59■□□□□ 0.73
DNMT1-215ENST00000588913 MMTAG2Q9BU76 263 aaKnown RBP19.59■□□□□ 0.73
DNMT1-215ENST00000588913 NRBP2Q9NSY0 501 aa19.59■□□□□ 0.73
DNMT1-215ENST00000588913 SPTLC3Q9NUV7 552 aa19.59■□□□□ 0.73
DNMT1-215ENST00000588913 CHD9Q3L8U1 2897 aa19.58■□□□□ 0.73
DNMT1-215ENST00000588913 GRXCR1A8MXD5 290 aa19.58■□□□□ 0.73
DNMT1-215ENST00000588913 VTNP04004 478 aa19.58■□□□□ 0.73
DNMT1-215ENST00000588913 MRPS6P82932 125 aaKnown RBP19.58■□□□□ 0.73
DNMT1-215ENST00000588913 PTPAQ15257 358 aa19.58■□□□□ 0.73
DNMT1-215ENST00000588913 SF3A1Q15459 793 aaKnown RBP19.58■□□□□ 0.73
DNMT1-215ENST00000588913 PIGOQ8TEQ8 1089 aa19.58■□□□□ 0.73
DNMT1-215ENST00000588913 RNPC3Q96LT9 517 aaKnown RBP19.58■□□□□ 0.73
DNMT1-215ENST00000588913 AGO3Q9H9G7 860 aaKnown RBP19.58■□□□□ 0.73
DNMT1-215ENST00000588913 DDX19AQ9NUU7 478 aaKnown RBP19.58■□□□□ 0.73
DNMT1-215ENST00000588913 MICAL3Q7RTP6 2002 aa19.58■□□□□ 0.72
DNMT1-215ENST00000588913 YWHABP31946 246 aaKnown RBP19.57■□□□□ 0.72
DNMT1-215ENST00000588913 FXR1P51114 621 aaKnown RBP eCLIP19.57■□□□□ 0.72
DNMT1-215ENST00000588913 DNM1Q05193 864 aaKnown RBP19.57■□□□□ 0.72
DNMT1-215ENST00000588913 LPIN1Q14693 890 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 NOLC1Q14978 699 aaKnown RBP eCLIP19.57■□□□□ 0.727e-9■■■■□ 21.9
DNMT1-215ENST00000588913 FOXD4L6Q3SYB3 417 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-215ENST00000588913 EFCAB12Q6NXP0 572 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 POTEGQ6S5H5 508 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 FOXD4L3Q6VB84 417 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-215ENST00000588913 TMCO2Q7Z6W1 182 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-215ENST00000588913 MYRIPQ8NFW9 859 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 TMEM40Q8WWA1 233 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 HERVK_113Q902F9 699 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 ZSWIM4Q9H7M6 989 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 CYP26B1Q9NR63 512 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 IGKV6-21A0A0C4DH24 114 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 A0A1W2PPC1 479 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 FGBP02675 491 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 GHRP10912 638 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 RFC2P35250 354 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 PSRC1Q6PGN9 363 aaPredicted RBP19.57■□□□□ 0.72
DNMT1-215ENST00000588913 METTL13Q8N6R0 699 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 DBF4BQ8NFT6 615 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 USP28Q96RU2 1077 aa19.57■□□□□ 0.72
DNMT1-215ENST00000588913 GOLGA6L4A6NEF3 574 aa19.56■□□□□ 0.72
DNMT1-215ENST00000588913 LYPLA2O95372 231 aa19.56■□□□□ 0.72
DNMT1-215ENST00000588913 PRPHP41219 470 aa19.56■□□□□ 0.72
DNMT1-215ENST00000588913 PLEKHG4Q58EX7 1191 aa19.56■□□□□ 0.72
DNMT1-215ENST00000588913 FBXO47Q5MNV8 452 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms