RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 CHP1Q99653 195 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 OGDHLQ9ULD0 1010 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 LRRC37A2A6NM11 1700 aa16.15■□□□□ 0.18
CCDC43-203ENST00000588210 ERICH4A6NGS2 130 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 MYCLP12524 364 aaPredicted RBP16.14■□□□□ 0.17
CCDC43-203ENST00000588210 DNM2P50570 870 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 REXO1Q8N1G1 1221 aaKnown RBP16.14■□□□□ 0.17
CCDC43-203ENST00000588210 HAUS4Q9H6D7 363 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 PDGFCQ9NRA1 345 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 MAGEC2Q9UBF1 373 aaPredicted RBP16.14■□□□□ 0.17
CCDC43-203ENST00000588210 LUC7L2Q9Y383 392 aaKnown RBP16.14■□□□□ 0.17
CCDC43-203ENST00000588210 KIAA0100Q14667 2235 aaKnown RBP16.14■□□□□ 0.17
CCDC43-203ENST00000588210 DUSP11O75319 330 aaKnown RBP16.14■□□□□ 0.17
CCDC43-203ENST00000588210 EN2P19622 333 aaPredicted RBP16.14■□□□□ 0.17
CCDC43-203ENST00000588210 ADCYAP1R1P41586 468 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 TNFAIP2Q03169 654 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 PCNX4Q63HM2 1172 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 LRRC15Q8TF66 581 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 SCFD2Q8WU76 684 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 CALCOCO1Q9P1Z2 691 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 MYO6Q9UM54 1294 aa16.14■□□□□ 0.17
CCDC43-203ENST00000588210 PPP1R2P41236 205 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 MEA1Q16626 185 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 HDXQ7Z353 690 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 KRT25Q7Z3Z0 450 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 ANKLE1Q8NAG6 615 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 IL31RAQ8NI17 732 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 ANO3Q9BYT9 981 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 TTYH3Q9C0H2 523 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 GBP3Q9H0R5 595 aa16.13■□□□□ 0.17
CCDC43-203ENST00000588210 OR52Z1P0C646 297 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 MRPS9P82933 396 aaKnown RBP16.12■□□□□ 0.17
CCDC43-203ENST00000588210 WDR59Q6PJI9 974 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 TRAPPC11Q7Z392 1133 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 CABP7Q86V35 215 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 TXLNBQ8N3L3 684 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 CCDC47Q96A33 483 aaKnown RBP16.12■□□□□ 0.17
CCDC43-203ENST00000588210 DUSP9Q99956 384 aaKnown RBP16.12■□□□□ 0.17
CCDC43-203ENST00000588210 NUP58Q9BVL2 599 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 WDR11Q9BZH6 1224 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 TMEM260Q9NX78 707 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 Q9Y3F1 56 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-203ENST00000588210 BICDL2A1A5D9 508 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 ADCY6O43306 1168 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 PLCG1P19174 1290 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 CCNE1P24864 410 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 ORC2Q13416 577 aaPredicted RBP16.12■□□□□ 0.17
CCDC43-203ENST00000588210 TTLL4Q14679 1199 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 TSR1Q2NL82 804 aaKnown RBP16.12■□□□□ 0.17
CCDC43-203ENST00000588210 DUSP28Q4G0W2 176 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 KCNV1Q6PIU1 500 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 SEPT14Q6ZU15 432 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 FAM114A1Q8IWE2 563 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 ARRDC4Q8NCT1 418 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 P2RX5Q93086 422 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 C7orf25Q9BPX7 421 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 XPNPEP3Q9NQH7 507 aa16.12■□□□□ 0.17
CCDC43-203ENST00000588210 GNEQ9Y223 722 aaKnown RBP16.12■□□□□ 0.17
CCDC43-203ENST00000588210 H3BQF6 201 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 NKRFO15226 690 aaKnown RBP eCLIP16.11■□□□□ 0.17
CCDC43-203ENST00000588210 SMPD1P17405 629 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 SREBF1P36956 1147 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 GPS2Q13227 327 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 GNPTABQ3T906 1256 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 COBLL1Q53SF7 1204 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 TRIM9Q9C026 710 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 L1RE1Q9UN81 338 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 FRMPD3Q5JV73 1810 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 KIAA1217Q5T5P2 1943 aa16.11■□□□□ 0.17
CCDC43-203ENST00000588210 RGS20O76081 388 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 TXNP10599 105 aaKnown RBP16.1■□□□□ 0.17
CCDC43-203ENST00000588210 KRT83P78385 493 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 NONOQ15233 471 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCDC43-203ENST00000588210 WDR93Q6P2C0 686 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 CSGALNACT2Q8N6G5 542 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 EHBP1Q8NDI1 1231 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 LENG1Q96BZ8 264 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-203ENST00000588210 INPP4AQ96PE3 977 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-203ENST00000588210 TUBGCP2Q9BSJ2 902 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 SPC25Q9HBM1 224 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 ABCB6Q9NP58 842 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 PSD3Q9NYI0 1048 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 TRIM10Q9UDY6 481 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 GUCA1BQ9UMX6 200 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 CAPN15O75808 1086 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 RHOXF2BP0C7M4 288 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 TGFB3P10600 412 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 CYLC1P35663 651 aaPredicted RBP16.1■□□□□ 0.17
CCDC43-203ENST00000588210 GJA9P57773 515 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 VSNL1P62760 191 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 FIGNQ5HY92 759 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 CCDC62Q6P9F0 684 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 RNF180Q86T96 592 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 EXOC4Q96A65 974 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 PLIN2Q99541 437 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 RHOXF2Q9BQY4 288 aa16.1■□□□□ 0.17
CCDC43-203ENST00000588210 PES1O00541 588 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms