RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 RTEL1Q9NZ71 1219 aa6□□□□□ -1.45
LIG3-210ENST00000588109 STIM2Q9P246 746 aa6□□□□□ -1.45
LIG3-210ENST00000588109 SEPT3Q9UH03 358 aa6□□□□□ -1.45
LIG3-210ENST00000588109 DDX25Q9UHL0 483 aaKnown RBP6□□□□□ -1.45
LIG3-210ENST00000588109 LRFN2Q9ULH4 789 aa6□□□□□ -1.45
LIG3-210ENST00000588109 PCDHB6Q9Y5E3 794 aa6□□□□□ -1.45
LIG3-210ENST00000588109 CLIC4Q9Y696 253 aa6□□□□□ -1.45
LIG3-210ENST00000588109 RPTORQ8N122 1335 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 SLC15A5A6NIM6 579 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 LAD1O00515 517 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 SPTLC2O15270 562 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 OIP5O43482 229 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 PRPF40AO75400 957 aaKnown RBP5.99□□□□□ -1.45
LIG3-210ENST00000588109 YEATS4O95619 227 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 CYP3A4P08684 503 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 OR52Z1P0C646 297 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 ALAS2P22557 587 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 MARCKSP29966 332 aaPredicted RBP5.99□□□□□ -1.45
LIG3-210ENST00000588109 RGS2P41220 211 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 NASPP49321 788 aaPredicted RBP5.99□□□□□ -1.45
LIG3-210ENST00000588109 ALDH5A1P51649 535 aaPredicted RBP5.99□□□□□ -1.45
LIG3-210ENST00000588109 LACTBP83111 547 aaPredicted RBP5.99□□□□□ -1.45
LIG3-210ENST00000588109 SETQ01105 290 aaPredicted RBP5.99□□□□□ -1.45
LIG3-210ENST00000588109 SP3Q02447 781 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 CCINQ13939 588 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 GRB14Q14449 540 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 SLC39A14Q15043 492 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 PGM5Q15124 567 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 STXBP2Q15833 593 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 CALCRLQ16602 461 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 CEP55Q53EZ4 464 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 PRR16Q569H4 304 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 ZNF468Q5VIY5 522 aaPredicted RBP5.99□□□□□ -1.45
LIG3-210ENST00000588109 PCNX4Q63HM2 1172 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 PPP4R3AQ6IN85 833 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 XRRA1Q6P2D8 792 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 MOXD1Q6UVY6 613 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 CLEC17AQ6ZS10 378 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 SYT9Q86SS6 491 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 NLRX1Q86UT6 975 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 PLA2G4DQ86XP0 818 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 FAM133AQ8N9E0 248 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 TTC16Q8NEE8 873 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 IL31RAQ8NI17 732 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 LEO1Q8WVC0 666 aaPredicted RBP5.99□□□□□ -1.45
LIG3-210ENST00000588109 EDARADDQ8WWZ3 215 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 SOCS4Q8WXH5 440 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 BHMTQ93088 406 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 IWS1Q96ST2 819 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 PDCD2LQ9BRP1 358 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 SAGE1Q9NXZ1 904 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 FRMPD4Q14CM0 1322 aa5.99□□□□□ -1.45
LIG3-210ENST00000588109 MYH7BA7E2Y1 1941 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 DNAJC25-GNG10A0A024R161 153 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 CYP3A7-CYP3A51PA0A087WV96 503 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 VWA3AA6NCI4 1184 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ASB14A6NK59 587 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 FAM86B1E9PN63 330 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 SLC37A4O43826 429 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 FKTNO75072 461 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 PPP6R2O75170 966 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 EIF3JO75822 258 aaKnown RBP5.98□□□□□ -1.45
LIG3-210ENST00000588109 STAM2O75886 525 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ABL1P00519 1130 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 FAM86B2P0C5J1 330 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 CYP2B6P20813 491 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 PTMSP20962 102 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 CYP3A7P24462 503 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 CIITAP33076 1130 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 MCM4P33991 863 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 TXKP42681 527 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 PSMC4P43686 418 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ATP2C1P98194 919 aaPredicted RBP5.98□□□□□ -1.45
LIG3-210ENST00000588109 MTMR1Q13613 665 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ARHGEF6Q15052 776 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 PTPAQ15257 358 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 TMEM266Q2M3C6 531 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ZNF792Q3KQV3 632 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 GNPTABQ3T906 1256 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 Q4G0T1 1027 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 DTHD1Q6ZMT9 781 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 SLCO4C1Q6ZQN7 724 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 VSIG10LQ86VR7 867 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 SLFN12Q8IYM2 578 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 RGL4Q8IZJ4 473 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 LINC00301Q8NCQ3 95 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 CRYGNQ8WXF5 182 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 PIK3R5Q8WYR1 880 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 FERMT2Q96AC1 680 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ERO1AQ96HE7 468 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 CDHR1Q96JP9 859 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 UIMC1Q96RL1 719 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 MXRA8Q9BRK3 442 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ZNF577Q9BSK1 485 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 RAB34Q9BZG1 259 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 ARHGAP39Q9C0H5 1083 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 IGFLR1Q9H665 355 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 JADE2Q9NQC1 790 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 TCEAL9Q9UHQ7 104 aa5.98□□□□□ -1.45
LIG3-210ENST00000588109 RCOR1Q9UKL0 485 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms