RNA–Protein interactions for RNA: ENST00000587882.5

ATP6V0A1-216, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 2

Gene ATP6V0A1, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-216	ENST00000587882	NOP58	Q9Y2X3	529 aa	Known RBP	4.98	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	MSRB2	Q9Y3D2	182 aa		4.98	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	PCDHA9	Q9Y5H5	950 aa		4.98	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	SNAPC4	Q5SXM2	1469 aa		4.98	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	KDM2B	Q8NHM5	1336 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	NCOA1	Q15788	1441 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	SMG6	Q86US8	1419 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	UGGT2	Q9NYU1	1516 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	TCRBV5S4A2T	A0A5A2	114 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	ESYT3	A0FGR9	886 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	ZNF839	A8K0R7	811 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	KCNK3	O14649	394 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	ADCY3	O60266	1144 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	IL18BP	O95998	194 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	APP	P05067	770 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	FAM153B	P0C7A2	387 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	PYGM	P11217	842 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	PDE6A	P16499	860 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	PTPN1	P18031	435 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	EPHA5	P54756	1037 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	GPR19	Q15760	415 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	CRY1	Q16526	586 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	USP39	Q53GS9	565 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	NOL8	Q76FK4	1167 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	PTRH1	Q86Y79	214 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	ZNF503	Q96F45	646 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	RNPC3	Q96LT9	517 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	DEPDC7	Q96QD5	511 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	ZFR2	Q9UPR6	939 aa	Known RBP	4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	SLC4A7	Q9Y6M7	1214 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	RNF123	Q5XPI4	1314 aa		4.97	□□□□□ -1.61
ATP6V0A1-216	ENST00000587882	GRIN2B	Q13224	1484 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	FAM90A27P	A6NNH2	459 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CLGN	O14967	610 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	GSTA4	O15217	222 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CHGB	P05060	677 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	MMP14	P50281	582 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	DBP	Q10586	325 aa	Predicted RBP	4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	ZNF568	Q3ZCX4	644 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	IGFL4	Q6B9Z1	124 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	NME8	Q8N427	588 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	PCDH19	Q8TAB3	1148 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	ZNF622	Q969S3	477 aa	Known RBP eCLIP	4.96	□□□□□ -1.62	8e-9	■□□□□ 10.4
ATP6V0A1-216	ENST00000587882	DHRS4	Q9BTZ2	278 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	KCND1	Q9NSA2	647 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	PTPN22	Q9Y2R2	807 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	ATP23	Q9Y6H3	246 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	MIA2	Q96PC5	1412 aa		4.96	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CCDC7	Q96M83	1385 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	PRAMEF25	A6NGN4	478 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CRTAM	O95727	393 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CSF2RB	P32927	897 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	MCM7	P33993	719 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	ANP32A	P39687	249 aa	Known RBP	4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	JAM2	P57087	298 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	GABRE	P78334	506 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	PURA	Q00577	322 aa	Known RBP	4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	PTH1R	Q03431	593 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	WDR72	Q3MJ13	1102 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	DPP8	Q6V1X1	898 aa	Predicted RBP	4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	C16orf59	Q7L2K0	433 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	WDR48	Q8TAF3	677 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	AJUBA	Q96IF1	538 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	EXOC2	Q96KP1	924 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	MYH16	Q9H6N6	1097 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	KANSL2	Q9H9L4	492 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	TERF2IP	Q9NYB0	399 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	NDOR1	Q9UHB4	597 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CBLC	Q9ULV8	474 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	SRPK3	Q9UPE1	567 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	WASHC2A	Q641Q2	1341 aa		4.95	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	MTUS2	Q5JR59	1369 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	KTN1	Q86UP2	1357 aa	Known RBP	4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CCDC66	A2RUB6	948 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	MAN2B1	O00754	1011 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	TPD52L2	O43399	206 aa	Known RBP	4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	MARCH6	O60337	910 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	AMY2A	P04746	511 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	C6orf222	P0C671	652 aa	Predicted RBP	4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	ZNF888	P0CJ79	500 aa	Predicted RBP	4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	HSPA5	P11021	654 aa	Known RBP	4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	NAT1	P18440	290 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	AMY2B	P19961	511 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	COMT	P21964	271 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	HSD3B2	P26439	372 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	RRAD	P55042	308 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	USP10	Q14694	798 aa	Known RBP	4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	FAM47C	Q5HY64	1035 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	TSHZ1	Q6ZSZ6	1077 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	LRP10	Q7Z4F1	713 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	TAX1BP1	Q86VP1	789 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CISD2	Q8N5K1	135 aa	Known RBP	4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CEP89	Q96ST8	783 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	CARD11	Q9BXL7	1154 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	TRIM8	Q9BZR9	551 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	IKZF4	Q9H2S9	585 aa		4.94	□□□□□ -1.62
ATP6V0A1-216	ENST00000587882	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms