RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 MARCH8Q5T0T0 291 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 CCDC183Q5T5S1 534 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 KCNV1Q6PIU1 500 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 RBM23Q86U06 439 aaKnown RBP8.85□□□□□ -0.99
VMP1-204ENST00000587259 RTN4RL1Q86UN2 441 aaPredicted RBP8.85□□□□□ -0.99
VMP1-204ENST00000587259 RNF135Q8IUD6 432 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 PLPP6Q8IY26 295 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 KCNG4Q8TDN1 519 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 TRAPPC12Q8WVT3 735 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 FAM49AQ9H0Q0 323 aaPredicted RBP8.85□□□□□ -0.99
VMP1-204ENST00000587259 RC3H2Q9HBD1 1191 aaKnown RBP8.85□□□□□ -0.99
VMP1-204ENST00000587259 HCSTQ9UBK5 93 aa8.85□□□□□ -0.99
VMP1-204ENST00000587259 MRPL42Q9Y6G3 142 aaKnown RBP8.85□□□□□ -0.99
VMP1-204ENST00000587259 FRMPD4Q14CM0 1322 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 GSTTP1A0A1W2PQM5 241 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 MEIS2O14770 477 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 TECTAO75443 2155 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 PLEKHA8P1O95397 391 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 YEATS4O95619 227 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 ITGB1P05556 798 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 FDPSP14324 419 aaKnown RBP8.84□□□□□ -0.99
VMP1-204ENST00000587259 RXRAP19793 462 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 CDC27P30260 824 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 ICAM3P32942 547 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 TROAPQ12815 778 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 PPFIA1Q13136 1202 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 BTG3Q14201 252 aaPredicted RBP8.84□□□□□ -0.99
VMP1-204ENST00000587259 SMAD2Q15796 467 aaKnown RBP8.84□□□□□ -0.99
VMP1-204ENST00000587259 GRIK4Q16099 956 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 UBE2SQ16763 222 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 CAVIN1Q6NZI2 390 aaKnown RBP8.84□□□□□ -0.99
VMP1-204ENST00000587259 FERMT3Q86UX7 667 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 PRSS33Q8NF86 280 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 ANP32BQ92688 251 aaKnown RBP8.84□□□□□ -0.99
VMP1-204ENST00000587259 ZNF689Q96CS4 500 aaPredicted RBP8.84□□□□□ -0.99
VMP1-204ENST00000587259 SAMD11Q96NU1 681 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 SLC26A6Q9BXS9 759 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 MAF1Q9H063 256 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 EHMT1Q9H9B1 1298 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 BARX2Q9UMQ3 279 aaPredicted RBP8.84□□□□□ -0.99
VMP1-204ENST00000587259 PLAGL2Q9UPG8 496 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 CDY2AQ9Y6F7 541 aa8.84□□□□□ -0.99
VMP1-204ENST00000587259 ZNF318Q5VUA4 2279 aa8.83□□□□□ -1
VMP1-204ENST00000587259 C5orf67F2Z3F1 127 aa8.83□□□□□ -1
VMP1-204ENST00000587259 STXBP3O00186 592 aa8.83□□□□□ -1
VMP1-204ENST00000587259 PER2O15055 1255 aa8.83□□□□□ -1
VMP1-204ENST00000587259 PRPF3O43395 683 aaKnown RBP8.83□□□□□ -1
VMP1-204ENST00000587259 GLP2RO95838 553 aa8.83□□□□□ -1
VMP1-204ENST00000587259 KCNA2P16389 499 aa8.83□□□□□ -1
VMP1-204ENST00000587259 ITGB5P18084 799 aa8.83□□□□□ -1
VMP1-204ENST00000587259 SP100P23497 879 aaPredicted RBP8.83□□□□□ -1
VMP1-204ENST00000587259 SMARCA1P28370 1054 aa8.83□□□□□ -1
VMP1-204ENST00000587259 ADD1P35611 737 aaKnown RBP8.83□□□□□ -1
VMP1-204ENST00000587259 NRIP1P48552 1158 aa8.83□□□□□ -1
VMP1-204ENST00000587259 NDUFV1P49821 464 aa8.83□□□□□ -1
VMP1-204ENST00000587259 DSG2Q14126 1118 aa8.83□□□□□ -1
VMP1-204ENST00000587259 NEDD9Q14511 834 aa8.83□□□□□ -1
VMP1-204ENST00000587259 TMEM266Q2M3C6 531 aa8.83□□□□□ -1
VMP1-204ENST00000587259 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
VMP1-204ENST00000587259 ZSCAN23Q3MJ62 389 aa8.83□□□□□ -1
VMP1-204ENST00000587259 GNPTABQ3T906 1256 aa8.83□□□□□ -1
VMP1-204ENST00000587259 FBXO47Q5MNV8 452 aa8.83□□□□□ -1
VMP1-204ENST00000587259 TMTC3Q6ZXV5 915 aa8.83□□□□□ -1
VMP1-204ENST00000587259 CCDC82Q8N4S0 544 aa8.83□□□□□ -1
VMP1-204ENST00000587259 KLHL23Q8NBE8 558 aa8.83□□□□□ -1
VMP1-204ENST00000587259 GPT2Q8TD30 523 aa8.83□□□□□ -1
VMP1-204ENST00000587259 LEO1Q8WVC0 666 aaPredicted RBP8.83□□□□□ -1
VMP1-204ENST00000587259 APBB2Q92870 758 aa8.83□□□□□ -1
VMP1-204ENST00000587259 CLP1Q92989 425 aaKnown RBP8.83□□□□□ -1
VMP1-204ENST00000587259 PGBD1Q96JS3 809 aa8.83□□□□□ -1
VMP1-204ENST00000587259 PPP1R16BQ96T49 567 aa8.83□□□□□ -1
VMP1-204ENST00000587259 PCYT2Q99447 389 aa8.83□□□□□ -1
VMP1-204ENST00000587259 C11orf84Q9BUA3 381 aaPredicted RBP8.83□□□□□ -1
VMP1-204ENST00000587259 APOL5Q9BWW9 433 aa8.83□□□□□ -1
VMP1-204ENST00000587259 FOXP1Q9H334 677 aaPredicted RBP8.83□□□□□ -1
VMP1-204ENST00000587259 DDX19AQ9NUU7 478 aaKnown RBP8.83□□□□□ -1
VMP1-204ENST00000587259 FAM86C1Q9NVL1 165 aa8.83□□□□□ -1
VMP1-204ENST00000587259 MAP3K20Q9NYL2 800 aaKnown RBP8.83□□□□□ -1
VMP1-204ENST00000587259 CLEC1BQ9P126 229 aa8.83□□□□□ -1
VMP1-204ENST00000587259 CD207Q9UJ71 328 aa8.83□□□□□ -1
VMP1-204ENST00000587259 TUBE1Q9UJT0 475 aa8.83□□□□□ -1
VMP1-204ENST00000587259 ZNF215Q9UL58 517 aaPredicted RBP8.83□□□□□ -1
VMP1-204ENST00000587259 CEP131Q9UPN4 1083 aa8.83□□□□□ -1
VMP1-204ENST00000587259 NRCAMQ92823 1304 aa8.82□□□□□ -1
VMP1-204ENST00000587259 FSD2A1L4K1 749 aa8.82□□□□□ -1
VMP1-204ENST00000587259 hCG_1984214I3L0E3 225 aa8.82□□□□□ -1
VMP1-204ENST00000587259 CAND2O75155 1236 aa8.82□□□□□ -1
VMP1-204ENST00000587259 DGKIO75912 1065 aa8.82□□□□□ -1
VMP1-204ENST00000587259 BMP15O95972 392 aa8.82□□□□□ -1
VMP1-204ENST00000587259 MMP1P03956 469 aa8.82□□□□□ -1
VMP1-204ENST00000587259 GNAT1P11488 350 aa8.82□□□□□ -1
VMP1-204ENST00000587259 U2AF2P26368 475 aaKnown RBP eCLIP8.82□□□□□ -1
VMP1-204ENST00000587259 FOXK1P85037 733 aa8.82□□□□□ -1
VMP1-204ENST00000587259 ADAM15Q13444 863 aa8.82□□□□□ -1
VMP1-204ENST00000587259 SMAD4Q13485 552 aaKnown RBP8.82□□□□□ -1
VMP1-204ENST00000587259 FOXD4L6Q3SYB3 417 aaPredicted RBP8.82□□□□□ -1
VMP1-204ENST00000587259 RILPL1Q5EBL4 403 aa8.82□□□□□ -1
VMP1-204ENST00000587259 PCNX4Q63HM2 1172 aa8.82□□□□□ -1
VMP1-204ENST00000587259 GALNT17Q6IS24 598 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms