RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 LINC01465Q8N7H1 131 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 NEK9Q8TD19 979 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 CCDC43Q96MW1 224 aaKnown RBP16.6■□□□□ 0.25
ATG4D-207ENST00000587256 EIF2AK1Q9BQI3 630 aaKnown RBP16.6■□□□□ 0.25
ATG4D-207ENST00000587256 ZSWIM4Q9H7M6 989 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 WRAP73Q9P2S5 460 aaPredicted RBP16.6■□□□□ 0.25
ATG4D-207ENST00000587256 PADI3Q9ULW8 664 aa16.6■□□□□ 0.25
ATG4D-207ENST00000587256 EVPLQ92817 2033 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.59■□□□□ 0.25
ATG4D-207ENST00000587256 RPS6KA5O75582 802 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 UPP2O95045 317 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 YWHABP31946 246 aaKnown RBP16.59■□□□□ 0.25
ATG4D-207ENST00000587256 NFX1Q12986 1120 aaKnown RBP16.59■□□□□ 0.25
ATG4D-207ENST00000587256 C4orf19Q8IY42 314 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 SLC7A3Q8WY07 619 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 GAS2L1Q99501 681 aaPredicted RBP16.59■□□□□ 0.25
ATG4D-207ENST00000587256 RAD9AQ99638 391 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 JPH2Q9BR39 696 aaPredicted RBP16.59■□□□□ 0.25
ATG4D-207ENST00000587256 FTHL17Q9BXU8 183 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 PRDM12Q9H4Q4 367 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 CYP26B1Q9NR63 512 aa16.59■□□□□ 0.25
ATG4D-207ENST00000587256 LCHNA4D1U4 455 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 DNM2P50570 870 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 CRYBB1P53674 252 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-207ENST00000587256 POLGP54098 1239 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-207ENST00000587256 NPEPPSP55786 919 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 NLRP11P59045 1033 aaKnown RBP16.58■□□□□ 0.24
ATG4D-207ENST00000587256 CUL4AQ13619 759 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 ODR4Q5SWX8 454 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 LARP1BQ659C4 914 aaKnown RBP16.58■□□□□ 0.24
ATG4D-207ENST00000587256 OTUD6AQ7L8S5 288 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 TMEM40Q8WWA1 233 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 NLRP7Q8WX94 980 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 ZNF668Q96K58 619 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-207ENST00000587256 YME1L1Q96TA2 773 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 CDHR5Q9HBB8 845 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 BMP2KQ9NSY1 1161 aaPredicted RBP16.58■□□□□ 0.24
ATG4D-207ENST00000587256 NOC2LQ9Y3T9 749 aaKnown RBP16.58■□□□□ 0.24
ATG4D-207ENST00000587256 PPME1Q9Y570 386 aa16.58■□□□□ 0.24
ATG4D-207ENST00000587256 MAFO75444 373 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-207ENST00000587256 ARHGEF15O94989 841 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 IBSPP21815 317 aaPredicted RBP16.57■□□□□ 0.24
ATG4D-207ENST00000587256 RFC5P40937 340 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 TECP42680 631 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 TAP1Q03518 808 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 ZNF710Q8N1W2 664 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 LINC01599Q8WXQ3 324 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 TOP1MTQ969P6 601 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 CEP89Q96ST8 783 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 CERS4Q9HA82 394 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 ERVK-5Q9HDB9 667 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 INSL6Q9Y581 213 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 PCDHB6Q9Y5E3 794 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 LOXHD1Q8IVV2 1947 aa16.57■□□□□ 0.24
ATG4D-207ENST00000587256 CHD9Q3L8U1 2897 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 IGKV6-21A0A0C4DH24 114 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 VPS37CA5D8V6 355 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-207ENST00000587256 K7ELQ4 463 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-207ENST00000587256 GPR182O15218 404 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 GPR32O75388 356 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 SLITRK3O94933 977 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 TOB1P50616 345 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-207ENST00000587256 GPC3P51654 580 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 DRP2Q13474 957 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 EMC2Q15006 297 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 RILPL1Q5EBL4 403 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 FAM228AQ86W67 206 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 EXOC8Q8IYI6 725 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 ARNTL2Q8WYA1 636 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 HSD17B14Q9BPX1 270 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 SUCLA2Q9P2R7 463 aaPredicted RBP16.56■□□□□ 0.24
ATG4D-207ENST00000587256 ST3GAL5Q9UNP4 418 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 CDH23Q9H251 3354 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 ARID2Q68CP9 1835 aa16.56■□□□□ 0.24
ATG4D-207ENST00000587256 DENND3A2RUS2 1198 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 LINC01553A4QN01 128 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 ENPP3O14638 875 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 LYPLA2O95372 231 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 PDCP20941 246 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 HTRA4P83105 476 aaPredicted RBP16.55■□□□□ 0.24
ATG4D-207ENST00000587256 PTGDRQ13258 359 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 HAUS3Q68CZ6 603 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 RHPN2Q8IUC4 686 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 ZNF579Q8NAF0 562 aaKnown RBP16.55■□□□□ 0.24
ATG4D-207ENST00000587256 TSPYL2Q9H2G4 693 aaPredicted RBP16.55■□□□□ 0.24
ATG4D-207ENST00000587256 ADAMTS10Q9H324 1103 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 TMX1Q9H3N1 280 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 MTUS1Q9ULD2 1270 aa16.55■□□□□ 0.24
ATG4D-207ENST00000587256 COL4A6Q14031 1691 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 LAD1O00515 517 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 ZBTB39O15060 712 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 DARSP14868 501 aaKnown RBP16.54■□□□□ 0.24
ATG4D-207ENST00000587256 IGFBP4P22692 258 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 EIF4BP23588 611 aaKnown RBP16.54■□□□□ 0.24
ATG4D-207ENST00000587256 FXR2P51116 673 aaKnown RBP eCLIP16.54■□□□□ 0.24
ATG4D-207ENST00000587256 CDC42EP1Q00587 391 aa16.54■□□□□ 0.24
ATG4D-207ENST00000587256 MAFAQ8NHW3 353 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms