RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 C7orf61Q8IZ16 206 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 GJA10Q969M2 543 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 UNC45AQ9H3U1 944 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 ZSCAN16Q9H4T2 348 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-204ENST00000586253 ZNF302Q9NR11 478 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 PDLIM7Q9NR12 457 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 DISC1Q9NRI5 854 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 PRKAG2Q9UGJ0 569 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 TBX21Q9UL17 535 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 PCDHA12Q9UN75 941 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 MTMR6Q9Y217 621 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 SAMM50Q9Y512 469 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 MAFBQ9Y5Q3 323 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-204ENST00000586253 TNRC18O15417 2968 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-204ENST00000586253 NRCAMQ92823 1304 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 KAT6AQ92794 2004 aa9.02□□□□□ -0.97
SMAD4-204ENST00000586253 CHMP2AO43633 222 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 B4GALT4O60513 344 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 BMP15O95972 392 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 OR52Z1P0C646 297 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 SMIM10L2AP0DMW4 78 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 SMIM10L2BP0DMW5 78 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 PRPHP41219 470 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 RESTQ13127 1097 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 ZNF174Q15697 407 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 SWSAP1Q6NVH7 229 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 MIER3Q7Z3K6 550 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 C4orf32Q8N8J7 132 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 ATP8B4Q8TF62 1192 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 HPS1Q92902 700 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 ATP6V0A1Q93050 837 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 FAM167AQ96KS9 214 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 UIMC1Q96RL1 719 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 TMEM60Q9H2L4 133 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 RNPEPQ9H4A4 650 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 TTC12Q9H892 705 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-204ENST00000586253 TRMT13Q9NUP7 481 aaKnown RBP9.01□□□□□ -0.97
SMAD4-204ENST00000586253 TMEM39AQ9NV64 488 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 HDAC6Q9UBN7 1215 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 GABBR1Q9UBS5 961 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 PCDHB6Q9Y5E3 794 aa9.01□□□□□ -0.97
SMAD4-204ENST00000586253 COL1A2P08123 1366 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 C17orf102A2RUQ5 167 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 RRN3P2A6NIE6 340 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 WIPF1O43516 503 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 HBP1O60381 514 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 DKC1O60832 514 aaKnown RBP eCLIP9□□□□□ -0.97
SMAD4-204ENST00000586253 RPLP2P05387 115 aaKnown RBP9□□□□□ -0.97
SMAD4-204ENST00000586253 P4HBP07237 508 aaKnown RBP9□□□□□ -0.97
SMAD4-204ENST00000586253 MARK3P27448 753 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 TXKP42681 527 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 CHMP4BP1P59074 171 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 USP46P62068 366 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 ADAM17P78536 824 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 ATP2C1P98194 919 aaPredicted RBP9□□□□□ -0.97
SMAD4-204ENST00000586253 GUCA2AQ02747 115 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 RBL2Q08999 1139 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 PPFIA1Q13136 1202 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 PLCB4Q15147 1175 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 EPHA7Q15375 998 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 PTGISQ16647 500 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 TMEM266Q2M3C6 531 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 ARL6IP4Q66PJ3 421 aaKnown RBP9□□□□□ -0.97
SMAD4-204ENST00000586253 GDF6Q6KF10 455 aaPredicted RBP9□□□□□ -0.97
SMAD4-204ENST00000586253 FERMT3Q86UX7 667 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 CAGE1Q8TC20 777 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 NEK9Q8TD19 979 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 RAB34Q9BZG1 259 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 TRPV6Q9H1D0 765 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 PRDM5Q9NQX1 630 aaPredicted RBP9□□□□□ -0.97
SMAD4-204ENST00000586253 NOD1Q9Y239 953 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 CEP290O15078 2479 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 LTBP2Q14767 1821 aa9□□□□□ -0.97
SMAD4-204ENST00000586253 TRIP12Q14669 1992 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-204ENST00000586253 MBLAC1A4D2B0 266 aaPredicted RBP8.99□□□□□ -0.97
SMAD4-204ENST00000586253 TRIM43BA6NCK2 446 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 EML1O00423 815 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 ZNF862O60290 1169 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 CAND2O75155 1236 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 TIMP1P01033 207 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 INSRRP14616 1297 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 RAG1P15918 1043 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 ATP4AP20648 1035 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 QARSP47897 775 aaKnown RBP8.99□□□□□ -0.97
SMAD4-204ENST00000586253 PSMC5P62195 406 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 PRKCEQ02156 737 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 PTK7Q13308 1070 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 BFSP2Q13515 415 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 PDIA5Q14554 519 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 GRIK4Q16099 956 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 ZNF484Q5JVG2 852 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 PRPF38BQ5VTL8 546 aaKnown RBP8.99□□□□□ -0.97
SMAD4-204ENST00000586253 TAF2Q6P1X5 1199 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 RPAINQ86UA6 219 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 SERINC5Q86VE9 423 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 CKAP2LQ8IYA6 745 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 CCDC155Q8N6L0 562 aa8.99□□□□□ -0.97
SMAD4-204ENST00000586253 IGSF22Q8N9C0 903 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms