RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 C4orf19Q8IY42 314 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 CKAP2LQ8IYA6 745 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 LARP4BQ92615 738 aaKnown RBP14.06□□□□□ -0.16
VMP1-202ENST00000585847 GLG1Q92896 1179 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 PAGE5Q96GU1 130 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 GLT1D1Q96MS3 346 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 LXNQ9BS40 222 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 ERAP1Q9NZ08 941 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 HDAC6Q9UBN7 1215 aa14.06□□□□□ -0.16
VMP1-202ENST00000585847 A0A087X0B3 334 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 A0A0U1RQG5 324 aaPredicted RBP14.05□□□□□ -0.16
VMP1-202ENST00000585847 PVALEFA0A1B0GWK0 134 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 ARVCFO00192 962 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 SMIM10L2AP0DMW4 78 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 SMIM10L2BP0DMW5 78 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 XRCC6P12956 609 aaKnown RBP eCLIP14.05□□□□□ -0.16
VMP1-202ENST00000585847 CCT6AP40227 531 aaKnown RBP14.05□□□□□ -0.16
VMP1-202ENST00000585847 ATN1P54259 1190 aaPredicted RBP14.05□□□□□ -0.16
VMP1-202ENST00000585847 ZNF200P98182 395 aaPredicted RBP14.05□□□□□ -0.16
VMP1-202ENST00000585847 PRKCEQ02156 737 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 DPYDQ12882 1025 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 KARSQ15046 597 aaKnown RBP14.05□□□□□ -0.16
VMP1-202ENST00000585847 TARBP2Q15633 366 aaKnown RBP14.05□□□□□ -0.16
VMP1-202ENST00000585847 LRRC26Q2I0M4 334 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 C1orf53Q5VUE5 145 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 FAM160B1Q5W0V3 765 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 ANO5Q75V66 913 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 KCNK18Q7Z418 384 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 DEFB123Q8N688 67 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 ATP8B4Q8TF62 1192 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 RAD54LQ92698 747 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 GDF15Q99988 308 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 C7orf25Q9BPX7 421 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 KATNAL1Q9BW62 490 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 AZI2Q9H6S1 392 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 DNM3Q9UQ16 869 aa14.05□□□□□ -0.16
VMP1-202ENST00000585847 SMTNL1A8MU46 457 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 IKBKBO14920 756 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 KIF20AO95235 890 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 OATP04181 439 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 INSRRP14616 1297 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 ERCC5P28715 1186 aaPredicted RBP14.04□□□□□ -0.16
VMP1-202ENST00000585847 ZNF165P49910 485 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 SLC26A2P50443 739 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 STIM1Q13586 685 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 TPRNQ4KMQ1 711 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 COBLL1Q53SF7 1204 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 NAALADL2Q58DX5 795 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 MARCH8Q5T0T0 291 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 GDF6Q6KF10 455 aaPredicted RBP14.04□□□□□ -0.16
VMP1-202ENST00000585847 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 NFRKBQ6P4R8 1299 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 FOXR2Q6PJQ5 311 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 POTEGQ6S5H5 508 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 TPH2Q8IWU9 490 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 TRAPPC12Q8WVT3 735 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 ATP6V0A1Q93050 837 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 ZBTB10Q96DT7 871 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 TIPINQ9BVW5 301 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 UBE2OQ9C0C9 1292 aaKnown RBP14.04□□□□□ -0.16
VMP1-202ENST00000585847 ZSWIM4Q9H7M6 989 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 SETD4Q9NVD3 440 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 GTF2IRD1Q9UHL9 959 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 ZNF215Q9UL58 517 aaPredicted RBP14.04□□□□□ -0.16
VMP1-202ENST00000585847 PCDHA5Q9Y5H7 936 aa14.04□□□□□ -0.16
VMP1-202ENST00000585847 LAMA3Q16787 3333 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 GOLGA6L19H0YKK7 550 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 RBAK-RBAKDNI3L0D1 243 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 HBP1O60381 514 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 CD4P01730 458 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 MAGEA10P43363 369 aaPredicted RBP14.03□□□□□ -0.16
VMP1-202ENST00000585847 PTPN11Q06124 597 aaPredicted RBP14.03□□□□□ -0.16
VMP1-202ENST00000585847 PSMD2Q13200 908 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 MORC3Q14149 939 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 TRIM60Q495X7 471 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 XKR3Q5GH77 459 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 PLA2G4FQ68DD2 849 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 FAM126BQ8IXS8 530 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 TDHQ8IZJ6 230 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 LMBR1Q8WVP7 490 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 BBXQ8WY36 941 aaPredicted RBP14.03□□□□□ -0.16
VMP1-202ENST00000585847 WNT8BQ93098 351 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 VTI1AQ96AJ9 217 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 NACC1Q96RE7 527 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 SH2D3AQ9BRG2 576 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 NIFKQ9BYG3 293 aaKnown RBP14.03□□□□□ -0.16
VMP1-202ENST00000585847 TRIM9Q9C026 710 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 BLOC1S4Q9NUP1 217 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 PPME1Q9Y570 386 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 LOXHD1Q8IVV2 1947 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 COL6A3P12111 3177 aa14.03□□□□□ -0.16
VMP1-202ENST00000585847 BECN2A8MW95 431 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 TREHO43280 583 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 B4GALT4O60513 344 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 RHOBTB3O94955 611 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 PRKCSHP14314 528 aaPredicted RBP14.02□□□□□ -0.17
VMP1-202ENST00000585847 SCP2P22307 547 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 YWHABP31946 246 aaKnown RBP14.02□□□□□ -0.17
VMP1-202ENST00000585847 NPEPPSP55786 919 aa14.02□□□□□ -0.17
VMP1-202ENST00000585847 RTP1P59025 263 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms