RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 PIK3CDO00329 1044 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 STK25O00506 426 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 EOMESO95936 686 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 PPM1AP35813 382 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 METAP2P50579 478 aaKnown RBP eCLIP16.17■□□□□ 0.189e-6■□□□□ 8.1
CSNK1D-224ENST00000584672 STAT5BP51692 787 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 WTAPQ15007 396 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 TMC5Q6UXY8 1006 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 KIAA0319LQ8IZA0 1049 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 LRRC43Q8N309 656 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 NME8Q8N427 588 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 IL25Q9H293 177 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 JADE2Q9NQC1 790 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 CYP26B1Q9NR63 512 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 RNF216Q9NWF9 866 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 CEP250Q9BV73 2442 aa16.17■□□□□ 0.18
CSNK1D-224ENST00000584672 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 ERICH2A1L162 156 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 DDX39AO00148 427 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 GPR182O15218 404 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 CXCL14O95715 111 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 VTNP04004 478 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 TRDNQ13061 729 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 ATAT1Q5SQI0 421 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 CATIPQ7Z7H3 387 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 ABI1Q8IZP0 508 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 PLCD3Q8N3E9 789 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 CYP2W1Q8TAV3 490 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 TNPO1Q92973 898 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 RTP3Q9BQQ7 232 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 SEC63Q9UGP8 760 aaKnown RBP16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 FRYLO94915 3013 aa16.16■□□□□ 0.18
CSNK1D-224ENST00000584672 C2orf16Q68DN1 1984 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 SPDYE4A6NLX3 237 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 NARSO43776 548 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 FAM189BP81408 668 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 DSC3Q14574 896 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 ODR4Q5SWX8 454 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 PLPPR4Q7Z2D5 763 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 TRMT1LQ7Z2T5 733 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 CMTR1Q8N1G2 835 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 SLC39A11Q8N1S5 342 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 DCLK2Q8N568 766 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 TMEM87AQ8NBN3 555 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 ZNF668Q96K58 619 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 PSTPIP2Q9H939 334 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 KCNH7Q9NS40 1196 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 PCDHA6Q9UN73 950 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 PCDHA8Q9Y5H6 950 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 TAF6LQ9Y6J9 622 aa16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 KMT2BQ9UMN6 2715 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-224ENST00000584672 SPDYE3A6NKU9 549 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 BACH1O14867 736 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 PLEKHA8P1O95397 391 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 CFHP08603 1231 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 RFX1P22670 979 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 TDGQ13569 410 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 PUM1Q14671 1186 aaKnown RBP eCLIP16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 CLLU1OSQ5K130 101 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 HELQQ8TDG4 1101 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 ACSF2Q96CM8 615 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 PGBD1Q96JS3 809 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 ELAC1Q9H777 363 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 DZANK1Q9NVP4 752 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 DUSP12Q9UNI6 340 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 USTQ9Y2C2 406 aa16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 TPRP12270 2363 aaKnown RBP16.14■□□□□ 0.17
CSNK1D-224ENST00000584672 HOXA2O43364 376 aa16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 CRYBB1P53674 252 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 ITGB3BPQ13352 177 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 SPECC1Q5M775 1068 aa16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 RALYLQ86SE5 291 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 TMEM173Q86WV6 379 aaPredicted RBP16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 VPS52Q8N1B4 723 aa16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 METTL13Q8N6R0 699 aa16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 SPZ1Q9BXG8 430 aa16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 CA14Q9ULX7 337 aa16.13■□□□□ 0.17
CSNK1D-224ENST00000584672 HBP1O60381 514 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 BCAR1P56945 870 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 CCDC149Q6ZUS6 474 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 CABP7Q86V35 215 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 ECHDC2Q86YB7 292 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 CCDC60Q8IWA6 550 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 CTCFLQ8NI51 663 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 RSAD2Q8WXG1 361 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 TMEM169Q96HH4 297 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 MXRA8Q9BRK3 442 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 KCNK12Q9HB15 430 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 OTOGLQ3ZCN5 2332 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 SPTBN2O15020 2390 aa16.12■□□□□ 0.17
CSNK1D-224ENST00000584672 KRBA1A5PL33 1030 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 ZBTB42B2RXF5 422 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 MAFGO15525 162 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 GPR32O75388 356 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 CCNE2O96020 404 aa16.11■□□□□ 0.17
CSNK1D-224ENST00000584672 RXRAP19793 462 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms