RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 PIGSQ96S52 555 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 SDF4Q9BRK5 362 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 EMILIN2Q9BXX0 1053 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 JPH1Q9HDC5 661 aaPredicted RBP12.74□□□□□ -0.37
CASC3-208ENST00000583649 CDH22Q9UJ99 828 aa12.74□□□□□ -0.37
CASC3-208ENST00000583649 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
CASC3-208ENST00000583649 KCNA2P16389 499 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 STAT5BP51692 787 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 CRYBB1P53674 252 aaPredicted RBP12.73□□□□□ -0.37
CASC3-208ENST00000583649 POLGP54098 1239 aaPredicted RBP12.73□□□□□ -0.37
CASC3-208ENST00000583649 ATXN1P54253 815 aaKnown RBP12.73□□□□□ -0.37
CASC3-208ENST00000583649 FAM189BP81408 668 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 DMWDQ09019 674 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 TRDNQ13061 729 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 PLCB4Q15147 1175 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 LETM2Q2VYF4 491 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 PHLDB3Q6NSJ2 640 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 MTHFD1LQ6UB35 978 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 TMC5Q6UXY8 1006 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 C15orf39Q6ZRI6 1047 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 GPR149Q86SP6 731 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 C12orf76Q8N812 135 aaPredicted RBP12.73□□□□□ -0.37
CASC3-208ENST00000583649 RIOX1Q9H6W3 641 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 TBC1D17Q9HA65 648 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 SEC63Q9UGP8 760 aaKnown RBP12.73□□□□□ -0.37
CASC3-208ENST00000583649 MAD2L2Q9UI95 211 aa12.73□□□□□ -0.37
CASC3-208ENST00000583649 NOC2LQ9Y3T9 749 aaKnown RBP12.73□□□□□ -0.37
CASC3-208ENST00000583649 A0A0D9SFI3 127 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 PIK3CDO00329 1044 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 MGEA5O60502 916 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 SRFP11831 508 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 KLRC1P26715 233 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 ZNF528Q3MIS6 628 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 CYP26C1Q6V0L0 522 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 VPS52Q8N1B4 723 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 SLC39A11Q8N1S5 342 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 DCLK2Q8N568 766 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 CASD1Q96PB1 797 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 SLC9A2Q9UBY0 812 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 CA14Q9ULX7 337 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 IRAK3Q9Y616 596 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 MYO10Q9HD67 2058 aa12.72□□□□□ -0.37
CASC3-208ENST00000583649 SPDYE3A6NKU9 549 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 LAMTOR5O43504 91 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 HBP1O60381 514 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 ATP9AO75110 1047 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 GBP2P32456 591 aaPredicted RBP12.71□□□□□ -0.37
CASC3-208ENST00000583649 SART3Q15020 963 aaKnown RBP12.71□□□□□ -0.37
CASC3-208ENST00000583649 FAM160B1Q5W0V3 765 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 RNF169Q8NCN4 708 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 BCO2Q9BYV7 579 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 PKD2L1Q9P0L9 805 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 FBXO4Q9UKT5 387 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 PCDHGA2Q9Y5H1 932 aa12.71□□□□□ -0.37
CASC3-208ENST00000583649 EP300Q09472 2414 aaPredicted RBP12.71□□□□□ -0.38
CASC3-208ENST00000583649 COL1A2P08123 1366 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 DNAH14Q0VDD8 3507 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 DCNP07585 359 aaKnown RBP12.7□□□□□ -0.38
CASC3-208ENST00000583649 ADRB1P08588 477 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 CTSAP10619 480 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 KLRC2P26717 231 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 METAP2P50579 478 aaKnown RBP eCLIP12.7□□□□□ -0.38
CASC3-208ENST00000583649 NMIQ13287 307 aaPredicted RBP12.7□□□□□ -0.38
CASC3-208ENST00000583649 LRRC55Q6ZSA7 311 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 ZNF589Q86UQ0 364 aaPredicted RBP12.7□□□□□ -0.38
CASC3-208ENST00000583649 ZBTB10Q96DT7 871 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 RRP36Q96EU6 259 aaKnown RBP12.7□□□□□ -0.38
CASC3-208ENST00000583649 JADE2Q9NQC1 790 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 ARHGEF3Q9NR81 526 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 DACT1Q9NYF0 836 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 GMEB2Q9UKD1 530 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 USP18Q9UMW8 372 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 TELO2Q9Y4R8 837 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 EPG5Q9HCE0 2579 aa12.7□□□□□ -0.38
CASC3-208ENST00000583649 KRBA1A5PL33 1030 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 BACH1O14867 736 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 EPCAMP16422 314 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 TMOD1P28289 359 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 PBX3P40426 434 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 MAGEA9P43362 315 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 BCAR1P56945 870 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 GRM4Q14833 912 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 ZNF484Q5JVG2 852 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 DCLRE1AQ6PJP8 1040 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 USP17L6PQ6QN14 398 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 CATIPQ7Z7H3 387 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 DDX53Q86TM3 631 aaKnown RBP12.69□□□□□ -0.38
CASC3-208ENST00000583649 SUMF1Q8NBK3 374 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 OTUD7AQ8TE49 926 aaPredicted RBP12.69□□□□□ -0.38
CASC3-208ENST00000583649 SLC22A17Q8WUG5 538 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 TRAPPC12Q8WVT3 735 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 DDX1Q92499 740 aaKnown RBP12.69□□□□□ -0.38
CASC3-208ENST00000583649 RILPL2Q969X0 211 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 ZBP1Q9H171 429 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 PSTPIP2Q9H939 334 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 SPATA6Q9NWH7 488 aaPredicted RBP12.69□□□□□ -0.38
CASC3-208ENST00000583649 RAB23Q9ULC3 237 aa12.69□□□□□ -0.38
CASC3-208ENST00000583649 CEP131Q9UPN4 1083 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms