RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 ANTXR2P58335 489 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 SMAD3P84022 425 aaKnown RBP5.21□□□□□ -1.58
VAPA-206ENST00000583475 ROM1Q03395 351 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 ADCY1Q08828 1119 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 PCOLCEQ15113 449 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 RNF151Q2KHN1 245 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 TTC38Q5R3I4 469 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 SLFN13Q68D06 897 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 OTOP2Q7RTS6 562 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 IFNL2Q8IZJ0 200 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 EFHBQ8N7U6 833 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 SAMD11Q96NU1 681 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 MEGF9Q9H1U4 602 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 ZMAT4Q9H898 229 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 JADE2Q9NQC1 790 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 TOMM22Q9NS69 142 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 MAPRE3Q9UPY8 281 aa5.21□□□□□ -1.58
VAPA-206ENST00000583475 LRRC32Q14392 662 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 MYBPC3Q14896 1274 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 ZMAT1Q5H9K5 638 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 SLFN12LQ6IEE8 588 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 KANSL1Q7Z3B3 1105 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 PRRT2Q7Z6L0 340 aaPredicted RBP5.2□□□□□ -1.58
VAPA-206ENST00000583475 FILIP1Q7Z7B0 1213 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 THNSL2Q86YJ6 484 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 LEO1Q8WVC0 666 aaPredicted RBP5.2□□□□□ -1.58
VAPA-206ENST00000583475 RTF1Q92541 710 aaKnown RBP5.2□□□□□ -1.58
VAPA-206ENST00000583475 GPR101Q96P66 508 aaPredicted RBP5.2□□□□□ -1.58
VAPA-206ENST00000583475 TUBGCP5Q96RT8 1024 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 KIAA1683Q9H0B3 1180 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 SPTLC3Q9NUV7 552 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 MAGEL2Q9UJ55 1249 aa5.2□□□□□ -1.58
VAPA-206ENST00000583475 MATN2O00339 956 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 ADCYAP1R1P41586 468 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 MRE11P49959 708 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 STAT5BP51692 787 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 KPNA1P52294 538 aaPredicted RBP5.19□□□□□ -1.58
VAPA-206ENST00000583475 NFYCQ13952 458 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 SPATS1Q496A3 300 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 AGBL4Q5VU57 503 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 UNQ6494/PRO21346Q6UXR6 183 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 RNF180Q86T96 592 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 PASD1Q8IV76 773 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 ZZZ3Q8IYH5 903 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 DNERQ8NFT8 737 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 OR2W6PQ8NHA6 318 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 NEIL1Q96FI4 390 aaPredicted RBP5.19□□□□□ -1.58
VAPA-206ENST00000583475 ZNF496Q96IT1 587 aaPredicted RBP5.19□□□□□ -1.58
VAPA-206ENST00000583475 GNRHR2Q96P88 292 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 LMF1Q96S06 567 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 KRTAP4-2Q9BYR5 136 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 SEMA4AQ9H3S1 761 aa5.19□□□□□ -1.58
VAPA-206ENST00000583475 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.19□□□□□ -1.58
VAPA-206ENST00000583475 ARHGAP6O43182 974 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 PRPF6O94906 941 aaKnown RBP5.18□□□□□ -1.58
VAPA-206ENST00000583475 FKBP9O95302 570 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 MAGEA10P43363 369 aaPredicted RBP5.18□□□□□ -1.58
VAPA-206ENST00000583475 MASP1P48740 699 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 KRTAP10-2P60368 255 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 RAC3P60763 192 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 NFKB2Q00653 900 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 MAP3K12Q12852 859 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 ICAM4Q14773 271 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 SART3Q15020 963 aaKnown RBP5.18□□□□□ -1.58
VAPA-206ENST00000583475 PRAMEF9Q5VWM5 478 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 USP30Q70CQ3 517 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 FKBP9P1Q75LS8 142 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 CIR1Q86X95 450 aaPredicted RBP5.18□□□□□ -1.58
VAPA-206ENST00000583475 PHYKPLQ8IUZ5 450 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 RTKN2Q8IZC4 609 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 CFHR4Q92496 578 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 LOXL4Q96JB6 756 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 LRRC37BQ96QE4 947 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 MYL10Q9BUA6 226 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 OR10A2Q9H208 303 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 POFUT1Q9H488 388 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 CD248Q9HCU0 757 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 SMPD4Q9NXE4 827 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 KCMF1Q9P0J7 381 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 SAE1Q9UBE0 346 aaPredicted RBP5.18□□□□□ -1.58
VAPA-206ENST00000583475 NR2E1Q9Y466 385 aa5.18□□□□□ -1.58
VAPA-206ENST00000583475 PATE3B3GLJ2 98 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 ELL2O00472 640 aaPredicted RBP5.17□□□□□ -1.58
VAPA-206ENST00000583475 BPIP17213 487 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 CD40P25942 277 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 LSSP48449 732 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 MEOX1P50221 254 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 BCAR1P56945 870 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 PHC1P78364 1004 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 OCRLQ01968 901 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 HGFACQ04756 655 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 ADCY2Q08462 1091 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 DGKDQ16760 1214 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 GPR158Q5T848 1215 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 EGFLAMQ63HQ2 1017 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 TIGD7Q6NT04 549 aaPredicted RBP5.17□□□□□ -1.58
VAPA-206ENST00000583475 TCTN3Q6NUS6 607 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 DDX46Q7L014 1031 aaKnown RBP5.17□□□□□ -1.58
VAPA-206ENST00000583475 TAX1BP1Q86VP1 789 aa5.17□□□□□ -1.58
VAPA-206ENST00000583475 TTC9BQ8N6N2 239 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms