RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 DYNC1LI2O43237 492 aaPredicted RBP16.21■□□□□ 0.18
SENP3-208ENST00000583277 ADCY3O60266 1144 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 HBP1O60381 514 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 DUSP11O75319 330 aaKnown RBP16.21■□□□□ 0.18
SENP3-208ENST00000583277 PTGS1P23219 599 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 MARK3P27448 753 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 POLGP54098 1239 aaPredicted RBP16.21■□□□□ 0.18
SENP3-208ENST00000583277 MAPK7Q13164 816 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 PLCB4Q15147 1175 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 TARBP2Q15633 366 aaKnown RBP16.21■□□□□ 0.18
SENP3-208ENST00000583277 MYOCDQ8IZQ8 938 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 MYCT1Q8N699 235 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 SLC17A8Q8NDX2 589 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 TRPV1Q8NER1 839 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 NELFBQ8WX92 580 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 SLC7A3Q8WY07 619 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 C17orf75Q9HAS0 396 aa16.21■□□□□ 0.18
SENP3-208ENST00000583277 UBE4BO95155 1302 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 SEPT4O43236 478 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 GAS2O43903 313 aaKnown RBP16.2■□□□□ 0.18
SENP3-208ENST00000583277 EMC2Q15006 297 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 ODR4Q5SWX8 454 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 FAM178BQ8IXR5 827 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 DAW1Q8N136 415 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 SLAIN1Q8ND83 568 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
SENP3-208ENST00000583277 HPS3Q969F9 1004 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 JPH2Q9BR39 696 aaPredicted RBP16.2■□□□□ 0.18
SENP3-208ENST00000583277 SH2D3AQ9BRG2 576 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 DHX33Q9H6R0 707 aaKnown RBP16.2■□□□□ 0.18
SENP3-208ENST00000583277 MRPL44Q9H9J2 332 aaKnown RBP16.2■□□□□ 0.18
SENP3-208ENST00000583277 MAPK8IP1Q9UQF2 711 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 TRPC6Q9Y210 931 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 KAT6AQ92794 2004 aa16.2■□□□□ 0.18
SENP3-208ENST00000583277 COL1A2P08123 1366 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 CEP350Q5VT06 3117 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 EIF3DO15371 548 aaKnown RBP eCLIP16.19■□□□□ 0.18
SENP3-208ENST00000583277 ZNF286BP0CG31 522 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 MAPTP10636 758 aaKnown RBP16.19■□□□□ 0.18
SENP3-208ENST00000583277 PLS3P13797 630 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 PRKAR2AP13861 404 aaKnown RBP16.19■□□□□ 0.18
SENP3-208ENST00000583277 RTP1P59025 263 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 CACNB2Q08289 660 aaPredicted RBP16.19■□□□□ 0.18
SENP3-208ENST00000583277 ALCAMQ13740 583 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 NCAPHQ15003 741 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 FAM102BQ5T8I3 360 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 SPATA1Q5VX52 437 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 FOXR2Q6PJQ5 311 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 P2RX5Q93086 422 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 C16orf70Q9BSU1 422 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 SPC25Q9HBM1 224 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 PDLIM7Q9NR12 457 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 KCNG1Q9UIX4 513 aa16.19■□□□□ 0.18
SENP3-208ENST00000583277 HTTP42858 3142 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 H3BRB1 525 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 RARBP10826 455 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 ELNP15502 786 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 CCNE1P24864 410 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 DMP1Q13316 513 aaPredicted RBP16.18■□□□□ 0.18
SENP3-208ENST00000583277 ZNF484Q5JVG2 852 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 LENG1Q96BZ8 264 aaPredicted RBP16.18■□□□□ 0.18
SENP3-208ENST00000583277 CEP89Q96ST8 783 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 TUT1Q9H6E5 874 aaKnown RBP16.18■□□□□ 0.18
SENP3-208ENST00000583277 TBC1D7Q9P0N9 293 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 NFE2L3Q9Y4A8 694 aa16.18■□□□□ 0.18
SENP3-208ENST00000583277 SFI1A8K8P3 1242 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 KPNA6O60684 536 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 GCNT3O95395 438 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 F2P00734 622 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 CNGA1P29973 690 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 LRRC63Q05C16 580 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 FSCN1Q16658 493 aaKnown RBP16.17■□□□□ 0.18
SENP3-208ENST00000583277 TPD52L1Q16890 204 aaPredicted RBP16.17■□□□□ 0.18
SENP3-208ENST00000583277 BMT2Q1RMZ1 405 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 MAP3K21Q5TCX8 1036 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 MAEAQ7L5Y9 396 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 EPM2AIP1Q7L775 607 aaPredicted RBP16.17■□□□□ 0.18
SENP3-208ENST00000583277 UPF3AQ9H1J1 476 aaKnown RBP16.17■□□□□ 0.18
SENP3-208ENST00000583277 XPNPEP1Q9NQW7 623 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 WBP1LQ9NX94 342 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 MAFO75444 373 aaPredicted RBP16.17■□□□□ 0.18
SENP3-208ENST00000583277 SCP2P22307 547 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 ABCD1P33897 745 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 SMTNP53814 917 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 STX17P56962 302 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 GJA9P57773 515 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 CENPPQ6IPU0 288 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 NOC3LQ8WTT2 800 aaKnown RBP16.17■□□□□ 0.18
SENP3-208ENST00000583277 SCFD1Q8WVM8 642 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 IFT74Q96LB3 600 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 TSG101Q99816 390 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 POLR3FQ9H1D9 316 aaPredicted RBP16.17■□□□□ 0.18
SENP3-208ENST00000583277 GPRC5CQ9NQ84 441 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 PCDHB13Q9Y5F0 798 aa16.17■□□□□ 0.18
SENP3-208ENST00000583277 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 H0YCG3 227 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 K7ENM7 598 aa16.16■□□□□ 0.18
SENP3-208ENST00000583277 NKX3-2P78367 333 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms