RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 MTMR14Q8NCE2 650 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 CCDC102AQ96A19 550 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 GBP3Q9H0R5 595 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 EHD2Q9NZN4 543 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 PON1P27169 355 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 USP14P54578 494 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 MTMR2Q13614 643 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 GJB7Q6PEY0 223 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 GBP6Q6ZN66 633 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 DNAAF5Q86Y56 855 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 GDAP1L1Q96MZ0 367 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 PACSIN1Q9BY11 444 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 TCEAL9Q9UHQ7 104 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 ZNF536O15090 1300 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 TNFAIP1Q13829 316 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 BMT2Q1RMZ1 405 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 IQCEQ6IPM2 695 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 NSMFQ6X4W1 530 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 SYN2Q92777 582 aaPredicted RBP14.95□□□□□ -0.02
SRSF1-205ENST00000582730 SLC35C1Q96A29 364 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 PSME4Q14997 1843 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 MYH10P35580 1976 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 FRMPD4Q14CM0 1322 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 UTRNP46939 3433 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 WDR46O15213 610 aaKnown RBP14.95□□□□□ -0.02
SRSF1-205ENST00000582730 PLA2G6O60733 806 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 HIP1RO75146 1068 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 MAGEA9P43362 315 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 SLC18A3Q16572 532 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 STXBP4Q6ZWJ1 553 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 PACS2Q86VP3 889 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 OSBPL9Q96SU4 736 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 HYOU1Q9Y4L1 999 aa14.95□□□□□ -0.02
SRSF1-205ENST00000582730 RGPD3A6NKT7 1758 aaPredicted RBP14.94□□□□□ -0.02
SRSF1-205ENST00000582730 RGPD4Q7Z3J3 1758 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 ANKRD65E5RJM6 399 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 FTCDO95954 541 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 KLRC1P26715 233 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 PSMC2P35998 433 aaKnown RBP14.94□□□□□ -0.02
SRSF1-205ENST00000582730 PTK2Q05397 1052 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 HSP90B2PQ58FF3 399 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 KLHDC7AQ5VTJ3 777 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 ICE2Q659A1 982 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 GSPT2Q8IYD1 628 aaKnown RBP14.94□□□□□ -0.02
SRSF1-205ENST00000582730 BCS1LQ9Y276 419 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 PHF20L1A8MW92 1017 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 K7ENM7 598 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 TRIM49P0CI25 452 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 TRIM49CP0CI26 452 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 PTPROQ16827 1216 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 PRAMEF18Q5VWM3 479 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 CCDC70Q6NSX1 233 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 PADI6Q6TGC4 694 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 LRRC31Q6UY01 552 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 MCF2L2Q86YR7 1114 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 RPGRIP1Q96KN7 1286 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 ZMYM2Q9UBW7 1377 aa14.94□□□□□ -0.02
SRSF1-205ENST00000582730 EIF3DO15371 548 aaKnown RBP eCLIP14.93□□□□□ -0.02
SRSF1-205ENST00000582730 SLC16A3O15427 465 aaKnown RBP14.93□□□□□ -0.02
SRSF1-205ENST00000582730 PALMO75781 387 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 HSD17B4P51659 736 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 MTMR1Q13613 665 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 TTC31Q49AM3 519 aaPredicted RBP14.93□□□□□ -0.02
SRSF1-205ENST00000582730 ARHGAP27Q6ZUM4 889 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 ZNF720Q7Z2F6 126 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 MICALL2Q8IY33 904 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 FAM71BQ8TC56 605 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 CLEC4DQ8WXI8 215 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 PGAP2Q9UHJ9 254 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 FZD1Q9UP38 647 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 FRMD4BQ9Y2L6 1034 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 PJA2O43164 708 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 GTF2A1P52655 376 aaPredicted RBP14.93□□□□□ -0.02
SRSF1-205ENST00000582730 SPP2Q13103 211 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 CREG2Q8IUH2 290 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 ZBED3Q96IU2 234 aaPredicted RBP14.93□□□□□ -0.02
SRSF1-205ENST00000582730 TAAR1Q96RJ0 339 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 RIT2Q99578 217 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 AIPL1Q9NZN9 384 aa14.93□□□□□ -0.02
SRSF1-205ENST00000582730 PACSIN2Q9UNF0 486 aaPredicted RBP14.93□□□□□ -0.02
SRSF1-205ENST00000582730 TESPA1A2RU30 521 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 TMEM150BA6NC51 233 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 EXOC3O60645 756 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 TCP1P17987 556 aaKnown RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 VCAM1P19320 739 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 PAFAH1B1P43034 410 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 RPS6P62753 249 aaKnown RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 LPAR1Q92633 364 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 VPS33BQ9H267 617 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 RPAP3Q9H6T3 665 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 AJAP1Q9UKB5 411 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 LRRIQ3A6PVS8 624 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 RNASE9P60153 205 aaKnown RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 TKFCQ3LXA3 575 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 ZNF571Q7Z3V5 609 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 KCTD17Q8N5Z5 321 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 SYTL5Q8TDW5 730 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-205ENST00000582730 PLEKHA4Q9H4M7 779 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 PCIF1Q9H4Z3 704 aa14.92□□□□□ -0.02
SRSF1-205ENST00000582730 PLCB1Q9NQ66 1216 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms