RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 TMX1Q9H3N1 280 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 ADGRG1Q9Y653 693 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 PMM2O15305 246 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 HOXA13P31271 388 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 HNRNPH3P31942 346 aaKnown RBP11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 SH3BP5LQ7L8J4 393 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 OTOP1Q7RTM1 612 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 SRGAP1Q7Z6B7 1085 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 NCAPG2Q86XI2 1143 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 MTRQ99707 1265 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 IFT122Q9HBG6 1241 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 SPC25Q9HBM1 224 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 PARP2Q9UGN5 583 aa11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC8-211ENST00000582539 ZNF233A6NK53 670 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 E9PMD0 336 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 CHMP4BP1P59074 171 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 GPR162Q16538 588 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 ACER1Q8TDN7 264 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 SEPT1Q8WYJ6 367 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 FAXDC2Q96IV6 333 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 FAM129AQ9BZQ8 928 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 MIF4GDA9UHW6 222 aaKnown RBP11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 IER5Q5VY09 327 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 USP49Q70CQ1 688 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 NELFCDQ8IXH7 590 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 TC2NQ8N9U0 490 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 CRACR2AQ9BSW2 395 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 STMN4Q9H169 189 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 KCNH7Q9NS40 1196 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 KPNA6O60684 536 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 TNNC2P02585 160 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 ATF7P17544 494 aaPredicted RBP11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 YWHABP31946 246 aaKnown RBP11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 SLC12A3P55017 1021 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 GIT2Q14161 759 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 EARS2Q5JPH6 523 aaKnown RBP11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 MMP19Q99542 508 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 ADPGKQ9BRR6 497 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 PLAGL2Q9UPG8 496 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 CNTNAP1P78357 1384 aa11.03□□□□□ -0.64
TRAPPC8-211ENST00000582539 CES2O00748 559 aa11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 OPA1O60313 960 aa11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 GNAT1P11488 350 aa11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 NPEPPSP55786 919 aa11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 RINT1Q6NUQ1 792 aa11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 REEP2Q9BRK0 252 aa11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 DNAJC18Q9H819 358 aa11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 HOMER3Q9NSC5 361 aa11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 CWC15Q9P013 229 aaKnown RBP11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 COL11A2P13942 1736 aaPredicted RBP11.02□□□□□ -0.64
TRAPPC8-211ENST00000582539 WTIPA6NIX2 430 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 EIF2AK2P19525 551 aaKnown RBP11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 MXI1P50539 228 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 ADKP55263 362 aaKnown RBP11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 GRIN1Q05586 938 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 ITIH3Q06033 890 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 LAMC2Q13753 1193 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 ARID5BQ14865 1188 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 MEA1Q16626 185 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 ZNF484Q5JVG2 852 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 CD302Q8IX05 232 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 ABRAQ8N0Z2 381 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 NHEJ1Q9H9Q4 299 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 VTA1Q9NP79 307 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 MAPK8IP1Q9UQF2 711 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 LOXHD1Q8IVV2 1947 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 POTEFA5A3E0 1075 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 FAM196BA6NMK8 535 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 FOXN1O15353 648 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 GGPS1O95749 300 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 POTEGQ6S5H5 508 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 POTEEQ6S8J3 1075 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 LBX2Q6XYB7 198 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 SCFD2Q8WU76 684 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 HAS1Q92839 578 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 FERMT1Q9BQL6 677 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 CPVLQ9H3G5 476 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 AGTPBP1Q9UPW5 1226 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 ECM29Q5VYK3 1845 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 A0A0A6YYK5 440 aaPredicted RBP11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 PAX3P23760 479 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 NOP2P46087 812 aaKnown RBP11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 INHBEP58166 350 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 RPS6P62753 249 aaKnown RBP11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 CYP4A11Q02928 519 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 LRMPQ12912 555 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 PGM5Q15124 567 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 WDR78Q5VTH9 848 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 KLRG1Q96E93 195 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 SCLT1Q96NL6 688 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 STK33Q9BYT3 514 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 OGFRQ9NZT2 677 aa11.02□□□□□ -0.65
TRAPPC8-211ENST00000582539 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms