RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 XKR9Q5GH70 373 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 MAP3K21Q5TCX8 1036 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 OLFML2BQ68BL8 750 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 ZNF746Q6NUN9 644 aaPredicted RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 FOXR2Q6PJQ5 311 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 PADI6Q6TGC4 694 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 SFR1Q86XK3 245 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 FAM178BQ8IXR5 827 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 SMAP1Q8IYB5 467 aaPredicted RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 DPF3Q92784 378 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 ATP6V0A1Q93050 837 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 CCDC51Q96ER9 411 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 CEP63Q96MT8 703 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 MED15Q96RN5 788 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 DUSP9Q99956 384 aaKnown RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 TIPINQ9BVW5 301 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 NAA15Q9BXJ9 866 aaKnown RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 SEMA6BQ9H3T3 888 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 LARSQ9P2J5 1176 aaKnown RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 DBR1Q9UK59 544 aaKnown RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 DIS3Q9Y2L1 958 aaKnown RBP10.24□□□□□ -0.77
SS18-220ENST00000582092 PCDHA10Q9Y5I2 948 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 NR2E3Q9Y5X4 410 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 FRMPD4Q14CM0 1322 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 ITIH6Q6UXX5 1313 aa10.24□□□□□ -0.77
SS18-220ENST00000582092 LGALS16A8MUM7 142 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 ARHGAP6O43182 974 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 STX10O60499 249 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 TRIM21P19474 475 aaKnown RBP10.23□□□□□ -0.77
SS18-220ENST00000582092 PMS1P54277 932 aaKnown RBP10.23□□□□□ -0.77
SS18-220ENST00000582092 ADKP55263 362 aaKnown RBP10.23□□□□□ -0.77
SS18-220ENST00000582092 CACNB2Q08289 660 aaPredicted RBP10.23□□□□□ -0.77
SS18-220ENST00000582092 ADAM9Q13443 819 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 ALCAMQ13740 583 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 PTPN14Q15678 1187 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 MAN2A1Q16706 1144 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 KNOP1Q1ED39 458 aaKnown RBP10.23□□□□□ -0.77
SS18-220ENST00000582092 ODR4Q5SWX8 454 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 ARMCX5Q6P1M9 558 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 SEPT14Q6ZU15 432 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 HS2ST1Q7LGA3 356 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 TRMT1LQ7Z2T5 733 aaKnown RBP10.23□□□□□ -0.77
SS18-220ENST00000582092 NECAB2Q7Z6G3 386 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 SLC17A8Q8NDX2 589 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 DRC1Q96MC2 740 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 PANX2Q96RD6 677 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 RUSC1Q9BVN2 902 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 JPH1Q9HDC5 661 aaPredicted RBP10.23□□□□□ -0.77
SS18-220ENST00000582092 ANKEF1Q9NU02 776 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 SLC9A2Q9UBY0 812 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 KCNG1Q9UIX4 513 aa10.23□□□□□ -0.77
SS18-220ENST00000582092 LUC7L2Q9Y383 392 aaKnown RBP10.23□□□□□ -0.77
SS18-220ENST00000582092 FRMPD3Q5JV73 1810 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 A0A1W2PQC6 194 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 GOLGA6L9A6NEM1 432 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 SFI1A8K8P3 1242 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 SPATA31C2B4DYI2 1134 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 PDXKO00764 312 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 EIF3DO15371 548 aaKnown RBP eCLIP10.22□□□□□ -0.77
SS18-220ENST00000582092 DHX15O43143 795 aaKnown RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 TUBB4AP04350 444 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 EPB41P11171 864 aaKnown RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 YWHABP31946 246 aaKnown RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 KCNJ6P48051 423 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 SMTNP53814 917 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 SP4Q02446 784 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 PPP2R3AQ06190 1150 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 RBL2Q08999 1139 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 TBX2Q13207 712 aaPredicted RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 ITGB3BPQ13352 177 aaPredicted RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 CCL14Q16627 93 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 EDRF1Q3B7T1 1238 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 VWA3BQ502W6 1294 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 KCNV1Q6PIU1 500 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 C1orf186Q6ZWK4 172 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 C4orf19Q8IY42 314 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 C17orf53Q8N3J3 647 aaPredicted RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 MSL3Q8N5Y2 521 aaKnown RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 RETREG2Q8NC44 543 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 NPLOC4Q8TAT6 608 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 GOLGA5Q8TBA6 731 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 INPP4AQ96PE3 977 aaPredicted RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 PURBQ96QR8 312 aaKnown RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 SENP7Q9BQF6 1050 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 SPTLC3Q9NUV7 552 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 TRMT1Q9NXH9 659 aaKnown RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 FAM184BQ9ULE4 1060 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 R3HCC1Q9Y3T6 440 aaKnown RBP10.22□□□□□ -0.77
SS18-220ENST00000582092 NFASCO94856 1347 aa10.22□□□□□ -0.77
SS18-220ENST00000582092 FRMD3A2A2Y4 597 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 USO1O60763 962 aaKnown RBP10.21□□□□□ -0.77
SS18-220ENST00000582092 HIP1RO75146 1068 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 PRPF6O94906 941 aaKnown RBP10.21□□□□□ -0.77
SS18-220ENST00000582092 LYPLA2O95372 231 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 IPO7O95373 1038 aaKnown RBP10.21□□□□□ -0.77
SS18-220ENST00000582092 TNNT1P13805 278 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 GUCY2CP25092 1073 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 CASP14P31944 242 aa10.21□□□□□ -0.77
SS18-220ENST00000582092 ALDH5A1P51649 535 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms