RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 SMIM10L2AP0DMW4 78 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 SMIM10L2BP0DMW5 78 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 PPFIA1Q13136 1202 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 POTEBQ6S5H4 581 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 FSIP1Q8NA03 581 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 BBXQ8WY36 941 aaPredicted RBP15.06■□□□□ 0
CSNK1D-220ENST00000581737 AK8Q96MA6 479 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 EIF2AK1Q9BQI3 630 aaKnown RBP15.06■□□□□ 0
CSNK1D-220ENST00000581737 HIPK3Q9H422 1215 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 CLSTN2Q9H4D0 955 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 ZSWIM4Q9H7M6 989 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 SLC28A3Q9HAS3 691 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 LRWD1Q9UFC0 647 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 GTF2IRD1Q9UHL9 959 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 HOOK1Q9UJC3 728 aaKnown RBP15.06■□□□□ 0
CSNK1D-220ENST00000581737 NOD1Q9Y239 953 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 CLIC4Q9Y696 253 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 NRCAMQ92823 1304 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 COL1A2P08123 1366 aa15.06■□□□□ 0
CSNK1D-220ENST00000581737 C17orf102A2RUQ5 167 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 VWA3AA6NCI4 1184 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 EPOPA6NHQ4 379 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 RRN3P2A6NIE6 340 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 OATP04181 439 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 PRKCEQ02156 737 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 PLCB4Q15147 1175 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 PTPAQ15257 358 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 IGSF22Q8N9C0 903 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 SCLYQ96I15 445 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 LXNQ9BS40 222 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 NOC4LQ9BVI4 516 aaKnown RBP15.05■□□□□ -0
CSNK1D-220ENST00000581737 FTOQ9C0B1 505 aaKnown RBP eCLIP15.05■□□□□ -0
CSNK1D-220ENST00000581737 EPHX3Q9H6B9 360 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 TUFT1Q9NNX1 390 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 NRBP2Q9NSY0 501 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 DACT1Q9NYF0 836 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 FAM13BQ9NYF5 915 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 HDAC6Q9UBN7 1215 aa15.05■□□□□ -0
CSNK1D-220ENST00000581737 LOXHD1Q8IVV2 1947 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 KDM3AQ9Y4C1 1321 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 SLC26A4O43511 780 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 B4GALT4O60513 344 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 ARHGEF15O94989 841 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 MUTP22033 750 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 LONP1P36776 959 aaKnown RBP15.04■□□□□ -0
CSNK1D-220ENST00000581737 UGCGQ16739 394 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 TPRNQ4KMQ1 711 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 XKR3Q5GH77 459 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 ZNF484Q5JVG2 852 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 KRT79Q5XKE5 535 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 SASS6Q6UVJ0 657 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 C4orf19Q8IY42 314 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 KRI1Q8N9T8 703 aaKnown RBP15.04■□□□□ -0
CSNK1D-220ENST00000581737 BANK1Q8NDB2 785 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 DYDC2Q96IM9 177 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 PYM1Q9BRP8 204 aaKnown RBP15.04■□□□□ -0
CSNK1D-220ENST00000581737 POLR3CQ9BUI4 534 aaPredicted RBP15.04■□□□□ -0
CSNK1D-220ENST00000581737 RNPEPQ9H4A4 650 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 CERS4Q9HA82 394 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 PCDHA7Q9UN72 937 aa15.04■□□□□ -0
CSNK1D-220ENST00000581737 ZNF862O60290 1169 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 LYPLA2O95372 231 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 RPLP2P05387 115 aaKnown RBP15.03■□□□□ -0
CSNK1D-220ENST00000581737 CMA1P23946 247 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 RPA1P27694 616 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 HOXC8P31273 242 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 HOXD11P31277 338 aaPredicted RBP15.03■□□□□ -0
CSNK1D-220ENST00000581737 CYP4A11Q02928 519 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 GRIK4Q16099 956 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 PTGISQ16647 500 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 PPP2R2DQ66LE6 453 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 OTUD6AQ7L8S5 288 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 TPH2Q8IWU9 490 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 CCDC155Q8N6L0 562 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 SNX29Q8TEQ0 813 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 KHSRPQ92945 711 aaKnown RBP eCLIP15.03■□□□□ -0
CSNK1D-220ENST00000581737 HSD17B14Q9BPX1 270 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 RGL1Q9NZL6 768 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 SEPT9Q9UHD8 586 aaPredicted RBP15.03■□□□□ -0
CSNK1D-220ENST00000581737 PPME1Q9Y570 386 aa15.03■□□□□ -0
CSNK1D-220ENST00000581737 SRPRBQ9Y5M8 271 aaKnown RBP15.03■□□□□ -0
CSNK1D-220ENST00000581737 TRIP12Q14669 1992 aaPredicted RBP15.03■□□□□ -0
CSNK1D-220ENST00000581737 INSRRP14616 1297 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 LIG1P18858 919 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 MARCKSP29966 332 aaPredicted RBP15.02■□□□□ -0
CSNK1D-220ENST00000581737 TXLNAP40222 546 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 CCT6AP40227 531 aaKnown RBP15.02■□□□□ -0
CSNK1D-220ENST00000581737 IL17AQ16552 155 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 UVSSAQ2YD98 709 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 GDF6Q6KF10 455 aaPredicted RBP15.02■□□□□ -0
CSNK1D-220ENST00000581737 SPRED2Q7Z698 418 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 KCTD17Q8N5Z5 321 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 PPP1R13LQ8WUF5 828 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 LMBR1Q8WVP7 490 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 CCDC43Q96MW1 224 aaKnown RBP15.02■□□□□ -0
CSNK1D-220ENST00000581737 TIGD1Q96MW7 591 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 LRFN3Q9BTN0 628 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 TRMT13Q9NUP7 481 aaKnown RBP15.02■□□□□ -0
CSNK1D-220ENST00000581737 SETD4Q9NVD3 440 aa15.02■□□□□ -0
CSNK1D-220ENST00000581737 TUBE1Q9UJT0 475 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms