RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 QARSP47897 775 aaKnown RBP21.9■■□□□ 1.1
SREBF1-220ENST00000581707 GRB10Q13322 594 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 MTERF2Q49AM1 385 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 ODR4Q5SWX8 454 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 FAM184AQ8NB25 1140 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 TMEM40Q8WWA1 233 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 LINC01599Q8WXQ3 324 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 OSMRQ99650 979 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 ERVK-5Q9HDB9 667 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 MTCH2Q9Y6C9 303 aa21.9■■□□□ 1.1
SREBF1-220ENST00000581707 TMEM150BA6NC51 233 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 DKC1O60832 514 aaKnown RBP eCLIP21.89■■□□□ 1.09
SREBF1-220ENST00000581707 P4HBP07237 508 aaKnown RBP21.89■■□□□ 1.09
SREBF1-220ENST00000581707 NLRP11P59045 1033 aaKnown RBP21.89■■□□□ 1.09
SREBF1-220ENST00000581707 EPHA7Q15375 998 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 CALCRLQ16602 461 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 FAM43BQ6ZT52 329 aaPredicted RBP21.89■■□□□ 1.09
SREBF1-220ENST00000581707 ZNF710Q8N1W2 664 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 MICALL1Q8N3F8 863 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 IL27Q8NEV9 243 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 C17orf80Q9BSJ5 609 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 TSPYL2Q9H2G4 693 aaPredicted RBP21.89■■□□□ 1.09
SREBF1-220ENST00000581707 TMX1Q9H3N1 280 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 ST3GAL5Q9UNP4 418 aa21.89■■□□□ 1.09
SREBF1-220ENST00000581707 GPR182O15218 404 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 LPXNO60711 386 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 NCAPH2Q6IBW4 605 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 ANO5Q75V66 913 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 FBXO18Q8NFZ0 1043 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 CEP89Q96ST8 783 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 SH2D3AQ9BRG2 576 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 ADAMTS10Q9H324 1103 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 PCDHA12Q9UN75 941 aa21.88■■□□□ 1.09
SREBF1-220ENST00000581707 WNT7AO00755 349 aa21.87■■□□□ 1.09
SREBF1-220ENST00000581707 NEMFO60524 1076 aa21.87■■□□□ 1.09
SREBF1-220ENST00000581707 SPIRE1Q08AE8 756 aa21.87■■□□□ 1.09
SREBF1-220ENST00000581707 FBXO22Q8NEZ5 403 aa21.87■■□□□ 1.09
SREBF1-220ENST00000581707 GDPD5Q8WTR4 605 aa21.87■■□□□ 1.09
SREBF1-220ENST00000581707 SAMD11Q96NU1 681 aa21.87■■□□□ 1.09
SREBF1-220ENST00000581707 FOXP1Q9H334 677 aaPredicted RBP21.87■■□□□ 1.09
SREBF1-220ENST00000581707 COL4A4P53420 1690 aaPredicted RBP21.86■■□□□ 1.09
SREBF1-220ENST00000581707 COL4A6Q14031 1691 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 ATP2B1P20020 1258 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 DNM2P50570 870 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 EPC2Q52LR7 807 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 FAM228AQ86W67 206 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 NPAS4Q8IUM7 802 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 FIBCD1Q8N539 461 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 PRDM6Q9NQX0 595 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 CYP26B1Q9NR63 512 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 RGL1Q9NZL6 768 aa21.86■■□□□ 1.09
SREBF1-220ENST00000581707 WRAP73Q9P2S5 460 aaPredicted RBP21.86■■□□□ 1.09
SREBF1-220ENST00000581707 IGKV6-21A0A0C4DH24 114 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 DENND3A2RUS2 1198 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 DGKIO75912 1065 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 STAG3L1P0CL83 205 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 EIF4BP23588 611 aaKnown RBP21.85■■□□□ 1.09
SREBF1-220ENST00000581707 TXKP42681 527 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 GPC3P51654 580 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 DRP2Q13474 957 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 PLA2G4FQ68DD2 849 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 C4orf19Q8IY42 314 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 CRIPAKQ8N1N5 446 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 ZNF689Q96CS4 500 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-220ENST00000581707 DYDC2Q96IM9 177 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 ZNF668Q96K58 619 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-220ENST00000581707 TBC1D32Q96NH3 1257 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 SCLT1Q96NL6 688 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 MTMR9Q96QG7 549 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 ADAM2Q99965 735 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 LXNQ9BS40 222 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 TTC12Q9H892 705 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-220ENST00000581707 LMCD1Q9NZU5 365 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 REV3LO60673 3130 aa21.85■■□□□ 1.09
SREBF1-220ENST00000581707 ADGRA3Q8IWK6 1321 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 NLRC5Q86WI3 1866 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 MGEA5O60502 916 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 MAFO75444 373 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-220ENST00000581707 MCM7P33993 719 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 SARSP49591 514 aaKnown RBP21.84■■□□□ 1.09
SREBF1-220ENST00000581707 NPEPPSP55786 919 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 CDC42EP1Q00587 391 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 GNL2Q13823 731 aaKnown RBP21.84■■□□□ 1.09
SREBF1-220ENST00000581707 TMEM192Q8IY95 271 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 NLRP7Q8WX94 980 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 TMX3Q96JJ7 454 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 JPH2Q9BR39 696 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-220ENST00000581707 ZSWIM4Q9H7M6 989 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 RC3H2Q9HBD1 1191 aaKnown RBP21.84■■□□□ 1.09
SREBF1-220ENST00000581707 RGS18Q9NS28 235 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 C1orf112Q9NSG2 853 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 LRFN2Q9ULH4 789 aa21.84■■□□□ 1.09
SREBF1-220ENST00000581707 SLITRK3O94933 977 aa21.83■■□□□ 1.09
SREBF1-220ENST00000581707 CYP4A11Q02928 519 aa21.83■■□□□ 1.09
SREBF1-220ENST00000581707 BTG3Q14201 252 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-220ENST00000581707 CTTNQ14247 550 aaKnown RBP21.83■■□□□ 1.09
SREBF1-220ENST00000581707 SLC24A5Q71RS6 500 aa21.83■■□□□ 1.09
SREBF1-220ENST00000581707 OTUD6AQ7L8S5 288 aa21.83■■□□□ 1.09
SREBF1-220ENST00000581707 TPH2Q8IWU9 490 aa21.83■■□□□ 1.09
SREBF1-220ENST00000581707 CEP170P1Q96L14 293 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms