RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
CSNK1D-213ENST00000580446 RNF169Q8NCN4 708 aa16.29■□□□□ 0.2
CSNK1D-213ENST00000580446 ZBTB44Q8NCP5 570 aa16.29■□□□□ 0.2
CSNK1D-213ENST00000580446 RGS18Q9NS28 235 aa16.29■□□□□ 0.2
CSNK1D-213ENST00000580446 DOCK5Q9H7D0 1870 aa16.29■□□□□ 0.2
CSNK1D-213ENST00000580446 ASH1LQ9NR48 2969 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 RAB11FIP3O75154 756 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 ZFYP08048 801 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 INSRRP14616 1297 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 CD72P21854 359 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 HAND2P61296 217 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 SNW1Q13573 536 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 NEDD9Q14511 834 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 UBXN2BQ14CS0 331 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 ZNF528Q3MIS6 628 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 GPATCH4Q5T3I0 446 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 SLC24A5Q71RS6 500 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 VPS52Q8N1B4 723 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 GLG1Q92896 1179 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 SFXN1Q9H9B4 322 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 ZSCAN32Q9NX65 697 aa16.28■□□□□ 0.2
CSNK1D-213ENST00000580446 CNOT1A5YKK6 2376 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 LILRB5O75023 590 aa16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 PPM1AP35813 382 aa16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 KRT76Q01546 638 aa16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 RING1Q06587 406 aa16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 TMEM117Q9H0C3 514 aa16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 FBXO4Q9UKT5 387 aa16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 ST3GAL5Q9UNP4 418 aa16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 LHX6Q9UPM6 363 aa16.27■□□□□ 0.2
CSNK1D-213ENST00000580446 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 RPS6KA5O75582 802 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 SPINK2P20155 84 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 SHC2P98077 582 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 WTAPQ15007 396 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 PLCB4Q15147 1175 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 UNQ6494/PRO21346Q6UXR6 183 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 LRRC43Q8N309 656 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 BCL7CQ8WUZ0 217 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 INPP4AQ96PE3 977 aaPredicted RBP16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 RPP25Q9BUL9 199 aaKnown RBP16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 BCO2Q9BYV7 579 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 ZBP1Q9H171 429 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 TCP11L1Q9NUJ3 509 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 TMEM161AQ9NX61 479 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 ANAPC4Q9UJX5 808 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 SQORQ9Y6N5 450 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 NBEAQ8NFP9 2946 aa16.26■□□□□ 0.19
CSNK1D-213ENST00000580446 DSPP15924 2871 aaKnown RBP16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 ITPR1Q14643 2758 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 FIBPO43427 364 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 SSBP05455 408 aaKnown RBP eCLIP16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 FGRP09769 529 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 GNPTABQ3T906 1256 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 ZMYM1Q5SVZ6 1142 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 LRSAM1Q6UWE0 723 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 PRR23BQ6ZRT6 265 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 MAF1Q9H063 256 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 C1orf112Q9NSG2 853 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 SEMA4GQ9NTN9 838 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 ERAP1Q9NZ08 941 aa16.25■□□□□ 0.19
CSNK1D-213ENST00000580446 ATP9AO75110 1047 aa16.24■□□□□ 0.19
CSNK1D-213ENST00000580446 NONOQ15233 471 aaKnown RBP eCLIP16.24■□□□□ 0.192e-6■■■□□ 18.9
CSNK1D-213ENST00000580446 CLLU1OSQ5K130 101 aa16.24■□□□□ 0.19
CSNK1D-213ENST00000580446 PRR23CQ6ZRP0 262 aa16.24■□□□□ 0.19
CSNK1D-213ENST00000580446 PNMA1Q8ND90 353 aa16.24■□□□□ 0.19
CSNK1D-213ENST00000580446 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
CSNK1D-213ENST00000580446 AMNQ9BXJ7 453 aa16.24■□□□□ 0.19
CSNK1D-213ENST00000580446 NUMBLQ9Y6R0 609 aa16.24■□□□□ 0.19
CSNK1D-213ENST00000580446 FAM170BA6NMN3 283 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 TRIM6-TRIM34B2RNG4 842 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 GCOM1H8Y6P7 765 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 TBC1D4O60343 1298 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 POLR2MP0CAP2 368 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 BCAR1P56945 870 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 GPC5P78333 572 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 GHRHRQ02643 423 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 ABI1Q8IZP0 508 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 STAG2Q8N3U4 1231 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 HELQQ8TDG4 1101 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 PCYT2Q99447 389 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 LRRCC1Q9C099 1032 aa16.23■□□□□ 0.19
CSNK1D-213ENST00000580446 CLUHO75153 1309 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 KANSL1LA0AUZ9 987 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 CYSRT1A8MQ03 144 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 HMMRO75330 724 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 STARD6P59095 220 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 GET4Q7L5D6 327 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 FAM228AQ86W67 206 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 HOMER1Q86YM7 354 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 TBC1D10CQ8IV04 446 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 TMEM169Q96HH4 297 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 VN1R3Q9BXE9 311 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 EPS15L1Q9UBC2 864 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 PCDHA2Q9Y5H9 948 aa16.22■□□□□ 0.19
CSNK1D-213ENST00000580446 NEDD4P46934 1319 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 AKAP13Q12802 2813 aa16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 SRRM3A6NNA2 597 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 ZC3H11AO75152 810 aaKnown RBP eCLIP16.21■□□□□ 0.19
CSNK1D-213ENST00000580446 RFPL2O75678 378 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms