RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ZBTB10Q96DT7 871 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 IFIH1Q9BYX4 1025 aaKnown RBP27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 KIF3AQ9Y496 699 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 ARIH1Q9Y4X5 557 aaPredicted RBP27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 GTF3C3Q9Y5Q9 886 aa27.96■■■□□ 2.07
CDC42EP4-205ENST00000580315 OATP04181 439 aa27.95■■■□□ 2.06
CDC42EP4-205ENST00000580315 B3GNT9Q6UX72 402 aa27.95■■■□□ 2.06
CDC42EP4-205ENST00000580315 TMEM192Q8IY95 271 aa27.95■■■□□ 2.06
CDC42EP4-205ENST00000580315 SLFN12Q8IYM2 578 aa27.95■■■□□ 2.06
CDC42EP4-205ENST00000580315 HCN4Q9Y3Q4 1203 aa27.95■■■□□ 2.06
CDC42EP4-205ENST00000580315 CDY2AQ9Y6F7 541 aa27.95■■■□□ 2.06
CDC42EP4-205ENST00000580315 PRKCEQ02156 737 aa27.94■■■□□ 2.06
CDC42EP4-205ENST00000580315 MGAT3Q09327 533 aa27.94■■■□□ 2.06
CDC42EP4-205ENST00000580315 PPP2R5CQ13362 524 aa27.94■■■□□ 2.06
CDC42EP4-205ENST00000580315 GPM6BQ13491 265 aa27.94■■■□□ 2.06
CDC42EP4-205ENST00000580315 GNL2Q13823 731 aaKnown RBP27.94■■■□□ 2.06
CDC42EP4-205ENST00000580315 PTCRAQ6ISU1 281 aaPredicted RBP27.94■■■□□ 2.06
CDC42EP4-205ENST00000580315 POTEDQ86YR6 584 aa27.94■■■□□ 2.06
CDC42EP4-205ENST00000580315 FBXO18Q8NFZ0 1043 aa27.94■■■□□ 2.06
CDC42EP4-205ENST00000580315 FAM86C2PA6NEL3 165 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 IL9P15248 144 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 TIGD5Q53EQ6 642 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 GJD3Q8N144 294 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 BANK1Q8NDB2 785 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 NEK9Q8TD19 979 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 TMX3Q96JJ7 454 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 BACH2Q9BYV9 841 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 TRPV2Q9Y5S1 764 aa27.93■■■□□ 2.06
CDC42EP4-205ENST00000580315 COL4A6Q14031 1691 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 ZBTB42B2RXF5 422 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 MAGEB2O15479 319 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 ZNF862O60290 1169 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 GHRP10912 638 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 UGCGQ16739 394 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 HAS1Q92839 578 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 FOXP1Q9H334 677 aaPredicted RBP27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 VAV3Q9UKW4 847 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 KAT6AQ92794 2004 aa27.92■■■□□ 2.06
CDC42EP4-205ENST00000580315 GRXCR2A6NFK2 248 aa27.91■■■□□ 2.06
CDC42EP4-205ENST00000580315 C22orf31O95567 290 aa27.91■■■□□ 2.06
CDC42EP4-205ENST00000580315 TCEAL5Q5H9L2 206 aa27.91■■■□□ 2.06
CDC42EP4-205ENST00000580315 FBXO47Q5MNV8 452 aa27.91■■■□□ 2.06
CDC42EP4-205ENST00000580315 SQORQ9Y6N5 450 aa27.91■■■□□ 2.06
CDC42EP4-205ENST00000580315 H3BQ06 376 aaPredicted RBP27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 DKC1O60832 514 aaKnown RBP eCLIP27.9■■■□□ 2.063e-10■■■■■ 40
CDC42EP4-205ENST00000580315 TMEM62Q0P6H9 643 aa27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 LPIN1Q14693 890 aa27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 CALCRLQ16602 461 aa27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 PUS10Q3MIT2 529 aaKnown RBP27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 XKR3Q5GH77 459 aa27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 TSHZ1Q6ZSZ6 1077 aa27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 METTL13Q8N6R0 699 aa27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 CELF4Q9BZC1 486 aaKnown RBP27.9■■■□□ 2.06
CDC42EP4-205ENST00000580315 NEMFO60524 1076 aa27.89■■■□□ 2.06
CDC42EP4-205ENST00000580315 CD2BP2O95400 341 aaKnown RBP27.89■■■□□ 2.06
CDC42EP4-205ENST00000580315 SSTR3P32745 418 aaPredicted RBP27.89■■■□□ 2.06
CDC42EP4-205ENST00000580315 PSMC5P62195 406 aa27.89■■■□□ 2.06
CDC42EP4-205ENST00000580315 COL19A1Q14993 1142 aa27.89■■■□□ 2.06
CDC42EP4-205ENST00000580315 KIAA0319LQ8IZA0 1049 aa27.89■■■□□ 2.06
CDC42EP4-205ENST00000580315 PABPC5Q96DU9 382 aaKnown RBP27.89■■■□□ 2.06
CDC42EP4-205ENST00000580315 SEPT9Q9UHD8 586 aaPredicted RBP27.89■■■□□ 2.06
CDC42EP4-205ENST00000580315 ATP2B1P20020 1258 aa27.88■■■□□ 2.05
CDC42EP4-205ENST00000580315 TMOD1P28289 359 aa27.88■■■□□ 2.05
CDC42EP4-205ENST00000580315 FIBCD1Q8N539 461 aa27.88■■■□□ 2.05
CDC42EP4-205ENST00000580315 NSUN3Q9H649 340 aaKnown RBP27.88■■■□□ 2.05
CDC42EP4-205ENST00000580315 KDM3AQ9Y4C1 1321 aa27.88■■■□□ 2.05
CDC42EP4-205ENST00000580315 EML1O00423 815 aa27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 P4HBP07237 508 aaKnown RBP27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 HOXD11P31277 338 aaPredicted RBP27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 QARSP47897 775 aaKnown RBP27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 EPHA7Q15375 998 aa27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 NCAPH2Q6IBW4 605 aa27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 NOSTRINQ8IVI9 506 aa27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 MAP7D2Q96T17 732 aa27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 PCDHA12Q9UN75 941 aa27.87■■■□□ 2.05
CDC42EP4-205ENST00000580315 DDX11L8A8MPP1 907 aa27.86■■■□□ 2.05
CDC42EP4-205ENST00000580315 LINC00271P0C7V0 271 aa27.86■■■□□ 2.05
CDC42EP4-205ENST00000580315 TBC1D8BQ0IIM8 1120 aa27.86■■■□□ 2.05
CDC42EP4-205ENST00000580315 ORC2Q13416 577 aaPredicted RBP27.86■■■□□ 2.05
CDC42EP4-205ENST00000580315 NIFKQ9BYG3 293 aaKnown RBP27.86■■■□□ 2.05
CDC42EP4-205ENST00000580315 NOL7Q9UMY1 257 aaKnown RBP27.86■■■□□ 2.05
CDC42EP4-205ENST00000580315 GINS2Q9Y248 185 aa27.86■■■□□ 2.05
CDC42EP4-205ENST00000580315 C5orf67F2Z3F1 127 aa27.85■■■□□ 2.05
CDC42EP4-205ENST00000580315 MCM7P33993 719 aa27.85■■■□□ 2.05
CDC42EP4-205ENST00000580315 CTNNB1P35222 781 aa27.85■■■□□ 2.05
CDC42EP4-205ENST00000580315 EFCAB12Q6NXP0 572 aa27.85■■■□□ 2.05
CDC42EP4-205ENST00000580315 EP400NLQ6ZTU2 488 aa27.85■■■□□ 2.05
CDC42EP4-205ENST00000580315 ZNF710Q8N1W2 664 aa27.85■■■□□ 2.05
CDC42EP4-205ENST00000580315 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.85■■■□□ 2.05
CDC42EP4-205ENST00000580315 ENPP3O14638 875 aa27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 RB1P06400 928 aa27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 CD52P31358 61 aa27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 BMPR1AP36894 532 aa27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 TXKP42681 527 aa27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 PAK2Q13177 524 aa27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 MTERF2Q49AM1 385 aa27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 FTHL17Q9BXU8 183 aa27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 TTC12Q9H892 705 aaPredicted RBP27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 RC3H2Q9HBD1 1191 aaKnown RBP27.84■■■□□ 2.05
CDC42EP4-205ENST00000580315 AKT3Q9Y243 479 aa27.84■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms