RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 CNTNAP3BQ96NU0 1288 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 NUDT12Q9BQG2 462 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 CNTNAP3Q9BZ76 1288 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 ASCC2Q9H1I8 757 aaPredicted RBP10.9□□□□□ -0.66
SNX11-206ENST00000580219 THAP9Q9H5L6 903 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 TUFT1Q9NNX1 390 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 PDLIM7Q9NR12 457 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 SAMSN1Q9NSI8 373 aaKnown RBP10.9□□□□□ -0.66
SNX11-206ENST00000580219 WDR70Q9NW82 654 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 LIMA1Q9UHB6 759 aaKnown RBP10.9□□□□□ -0.66
SNX11-206ENST00000580219 PNMA3Q9UL41 463 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 ADAMTS5Q9UNA0 930 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 GDAQ9Y2T3 454 aa10.9□□□□□ -0.66
SNX11-206ENST00000580219 COL11A1P12107 1806 aaPredicted RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 MAP1BP46821 2468 aaKnown RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 MED19A0JLT2 244 aaPredicted RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 TRIM43BA6NCK2 446 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 GRXCR1A8MXD5 290 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 VWA5AO00534 786 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 OFD1O75665 1012 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 PSMD10O75832 226 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 SFPQP23246 707 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNX11-206ENST00000580219 EEF1GP26641 437 aaKnown RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 HERVK_113P62684 666 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 COG2Q14746 738 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 NOLC1Q14978 699 aaKnown RBP eCLIP10.89□□□□□ -0.67
SNX11-206ENST00000580219 NR1I3Q14994 352 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 PCNX4Q63HM2 1172 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 SPECC1LQ69YQ0 1117 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 TTI2Q6NXR4 508 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 LBX2Q6XYB7 198 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 APTXQ7Z2E3 356 aaKnown RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 FAM114A1Q8IWE2 563 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 GUF1Q8N442 669 aaKnown RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 NEK9Q8TD19 979 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 TBC1D5Q92609 795 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 DDX12PQ92771 950 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 P2RX5Q93086 422 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 TRIM43Q96BQ3 446 aaPredicted RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 ATG4CQ96DT6 458 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 NAP1L5Q96NT1 182 aaPredicted RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 RIT2Q99578 217 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 MXRA8Q9BRK3 442 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 KCND1Q9NSA2 647 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 INTS13Q9NVM9 706 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 ADD3Q9UEY8 706 aaKnown RBP10.89□□□□□ -0.67
SNX11-206ENST00000580219 COG5Q9UP83 839 aa10.89□□□□□ -0.67
SNX11-206ENST00000580219 ITIH6Q6UXX5 1313 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 CACNA1HO95180 2353 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 MED24O75448 989 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 KIF20AO95235 890 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 FGFR1OPO95684 399 aaKnown RBP10.88□□□□□ -0.67
SNX11-206ENST00000580219 PLA2G4BP0C869 781 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 ALAS1P13196 640 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 TAL1P17542 331 aaPredicted RBP10.88□□□□□ -0.67
SNX11-206ENST00000580219 CCND3P30281 292 aaPredicted RBP10.88□□□□□ -0.67
SNX11-206ENST00000580219 SLC12A3P55017 1021 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 STX17P56962 302 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 TBX2Q13207 712 aaPredicted RBP10.88□□□□□ -0.67
SNX11-206ENST00000580219 ECM1Q16610 540 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 LRCH2Q5VUJ6 765 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 NCAPH2Q6IBW4 605 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 HFE2Q6ZVN8 426 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 KCNK18Q7Z418 384 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 CCDC65Q8IXS2 484 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 ANKRD13CQ8N6S4 541 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 REPS2Q8NFH8 660 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 SYTL5Q8TDW5 730 aaPredicted RBP10.88□□□□□ -0.67
SNX11-206ENST00000580219 SMCR8Q8TEV9 937 aaPredicted RBP10.88□□□□□ -0.67
SNX11-206ENST00000580219 DNAJC19Q96DA6 116 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 RAVER2Q9HCJ3 691 aaKnown RBP10.88□□□□□ -0.67
SNX11-206ENST00000580219 FAM86C1Q9NVL1 165 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 HOXC10Q9NYD6 342 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 PYCARDQ9ULZ3 195 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 KIAA1024Q9UPX6 916 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 DNM3Q9UQ16 869 aa10.88□□□□□ -0.67
SNX11-206ENST00000580219 FRMD3A2A2Y4 597 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 KCNJ18B7U540 433 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 NFIBO00712 420 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 GAS7O60861 476 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 EYA4O95677 639 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 SPATA31C1P0DKV0 1188 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 SKILP12757 684 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 CYP11B2P19099 503 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 PBX1P40424 430 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 STAT3P40763 770 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 CCZ1BP86790 482 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 CCZ1P86791 482 aaPredicted RBP10.87□□□□□ -0.67
SNX11-206ENST00000580219 LRRC63Q05C16 580 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 CACNB2Q08289 660 aaPredicted RBP10.87□□□□□ -0.67
SNX11-206ENST00000580219 LRMPQ12912 555 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 STK4Q13043 487 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 CAMK2BQ13554 666 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 TRIM14Q14142 442 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 KCNJ12Q14500 433 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 TRIM60Q495X7 471 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 TCP11X2Q5H9J9 407 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 CENPPQ6IPU0 288 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 B3GNT9Q6UX72 402 aa10.87□□□□□ -0.67
SNX11-206ENST00000580219 CATSPER3Q86XQ3 398 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms