RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	PDE6A	P16499	860 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	SLC1A4	P43007	532 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	SHC2	P98077	582 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	ARHGAP1	Q07960	439 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	DDX10	Q13206	875 aa	Known RBP	7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	LY6K	Q17RY6	165 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	ATAT1	Q5SQI0	421 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	RNF207	Q6ZRF8	634 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	SEPT14	Q6ZU15	432 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	SSH1	Q8WYL5	1049 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	CCDC8	Q9H0W5	538 aa	Predicted RBP	7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	C1orf115	Q9H7X2	142 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	ARMT1	Q9H993	441 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	ZNF287	Q9HBT7	754 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	CYLD	Q9NQC7	956 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	WNT16	Q9UBV4	365 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	SIT1	Q9Y3P8	196 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	DENND4A	Q7Z401	1863 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	PATJ	Q8NI35	1801 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	FRYL	O94915	3013 aa		7.06	□□□□□ -1.28
KPNB1-209	ENST00000580158	MYH6	P13533	1939 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	PRKAB2	O43741	272 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	PLA2G6	O60733	806 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	ICAM1	P05362	532 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	DCN	P07585	359 aa	Known RBP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	ZNF286B	P0CG31	522 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	AR	P10275	920 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	GNAT1	P11488	350 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	RHOQ	P17081	205 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	EDNRB	P24530	442 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	PML	P29590	882 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	ERVFC1	P60507	584 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	SNAP25	P60880	206 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	LAMC2	Q13753	1193 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	KCNC3	Q14003	757 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	NONO	Q15233	471 aa	Known RBP eCLIP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	ZNF528	Q3MIS6	628 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	PAN2	Q504Q3	1202 aa	Known RBP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	PLPP4	Q5VZY2	271 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	XRRA1	Q6P2D8	792 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	CCDC62	Q6P9F0	684 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	GPR20	Q99678	358 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	ENTPD7	Q9NQZ7	604 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	CUEDC1	Q9NWM3	386 aa	Predicted RBP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	TMEM260	Q9NX78	707 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	ARPP21	Q9UBL0	812 aa	Predicted RBP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	PUF60	Q9UHX1	559 aa	Known RBP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	DBNL	Q9UJU6	430 aa	Known RBP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	RAB23	Q9ULC3	237 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	PRR12	Q9ULL5	1215 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	SMG5	Q9UPR3	1016 aa	Known RBP	7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	PCDHGA2	Q9Y5H1	932 aa		7.05	□□□□□ -1.28
KPNB1-209	ENST00000580158	SETX	Q7Z333	2677 aa	Known RBP	7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	RBAK-RBAKDN	I3L0D1	243 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	LAMTOR5	O43504	91 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	TBC1D4	O60343	1298 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	PPFIA4	O75335	1185 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	FGF18	O76093	207 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	MBD4	O95243	580 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	EOMES	O95936	686 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	RASA1	P20936	1047 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	RARS	P54136	660 aa	Known RBP	7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	IL31	Q6EBC2	164 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	RCSD1	Q6JBY9	416 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	CTR9	Q6PD62	1173 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	UNQ6494/PRO21346	Q6UXR6	183 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	RIPOR1	Q6ZS17	1223 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	OTOP3	Q7RTS5	596 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	NPAS4	Q8IUM7	802 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	TRIM22	Q8IYM9	498 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	THNSL1	Q8IYQ7	743 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	STK11IP	Q8N1F8	1099 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	PPTC7	Q8NI37	304 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	CEP95	Q96GE4	821 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	OSBPL7	Q9BZF2	842 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	API5	Q9BZZ5	524 aa	Known RBP	7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	TBC1D17	Q9HA65	648 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	NGRN	Q9NPE2	291 aa	Known RBP	7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	MTMR4	Q9NYA4	1195 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	IGSF9	Q9P2J2	1179 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	ANKFY1	Q9P2R3	1169 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	CDH22	Q9UJ99	828 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	FBXO4	Q9UKT5	387 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	PNMA2	Q9UL42	364 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	LRFN2	Q9ULH4	789 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	SLC4A4	Q9Y6R1	1079 aa		7.04	□□□□□ -1.28
KPNB1-209	ENST00000580158	ASPM	Q8IZT6	3477 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	CNOT1	A5YKK6	2376 aa	Known RBP	7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	C2orf16	Q68DN1	1984 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	PNMA6E	A0A0J9YXQ4	647 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	KRBA1	A5PL33	1030 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	TMEM8B	A6NDV4	472 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	MEN1	O00255	615 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	NFIB	O00712	420 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	TREH	O43280	583 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	SURF6	O75683	361 aa	Known RBP	7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	GNAI2	P04899	355 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	GHR	P10912	638 aa		7.03	□□□□□ -1.28
KPNB1-209	ENST00000580158	MCC	P23508	829 aa		7.03	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms