RNA–Protein interactions for RNA: ENST00000579755.1

CDKN2A-214, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN2A, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-214ENST00000579755 ERVK-5Q9HDB9 667 aa26.75■■□□□ 1.87
CDKN2A-214ENST00000579755 ORC3Q9UBD5 711 aaPredicted RBP26.75■■□□□ 1.87
CDKN2A-214ENST00000579755 COL4A6Q14031 1691 aa26.75■■□□□ 1.87
CDKN2A-214ENST00000579755 TCF20Q9UGU0 1960 aaKnown RBP26.75■■□□□ 1.87
CDKN2A-214ENST00000579755 MARCH6O60337 910 aa26.74■■□□□ 1.87
CDKN2A-214ENST00000579755 CLCN3P51790 818 aa26.74■■□□□ 1.87
CDKN2A-214ENST00000579755 ZNF710Q8N1W2 664 aa26.74■■□□□ 1.87
CDKN2A-214ENST00000579755 SCLT1Q96NL6 688 aa26.74■■□□□ 1.87
CDKN2A-214ENST00000579755 ADAM2Q99965 735 aa26.74■■□□□ 1.87
CDKN2A-214ENST00000579755 TMX1Q9H3N1 280 aa26.74■■□□□ 1.87
CDKN2A-214ENST00000579755 C1orf112Q9NSG2 853 aa26.74■■□□□ 1.87
CDKN2A-214ENST00000579755 RALGAPA2Q2PPJ7 1873 aa26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 C5orf67F2Z3F1 127 aa26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 ZNF862O60290 1169 aa26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 SARSP49591 514 aaKnown RBP26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 NLRP11P59045 1033 aaKnown RBP26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 TBC1D8BQ0IIM8 1120 aa26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 NPY5RQ15761 445 aa26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 PAN2Q504Q3 1202 aaKnown RBP26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 CMTR2Q8IYT2 770 aaKnown RBP26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 LRRC71Q8N4P6 559 aa26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 TMEM40Q8WWA1 233 aa26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 UBE2ZQ9H832 354 aaPredicted RBP26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 RC3H2Q9HBD1 1191 aaKnown RBP26.73■■□□□ 1.87
CDKN2A-214ENST00000579755 UGCGQ16739 394 aa26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 EP400NLQ6ZTU2 488 aa26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 NEK8Q86SG6 692 aa26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 CLP1Q92989 425 aaKnown RBP26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 ZSCAN31Q96LW9 406 aaPredicted RBP26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 NAP1L4Q99733 375 aaKnown RBP26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 PLVAPQ9BX97 442 aa26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 LMAN2LQ9H0V9 348 aa26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 NSUN3Q9H649 340 aaKnown RBP26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 BRMS1Q9HCU9 246 aa26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 SEPT9Q9UHD8 586 aaPredicted RBP26.72■■□□□ 1.87
CDKN2A-214ENST00000579755 GPR32O75388 356 aa26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 BECN1Q14457 450 aa26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 XKR3Q5GH77 459 aa26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 PIK3AP1Q6ZUJ8 805 aa26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 SLC24A5Q71RS6 500 aa26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 MBOAT7Q96N66 472 aa26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 NECAB3Q96P71 396 aaPredicted RBP26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 RGS18Q9NS28 235 aa26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 LIMCH1Q9UPQ0 1083 aa26.71■■□□□ 1.87
CDKN2A-214ENST00000579755 TRANK1O15050 2925 aa26.7■■□□□ 1.87
CDKN2A-214ENST00000579755 CCNT1O60563 726 aaKnown RBP26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 GCFC2P16383 781 aaKnown RBP26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 ZSCAN20P17040 1043 aaPredicted RBP26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 KCNA5P22460 613 aa26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 DNM2P50570 870 aa26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 MTERF2Q49AM1 385 aa26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 SPOUT1Q5T280 376 aaKnown RBP26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 HSCBQ8IWL3 235 aa26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 NECAB1Q8N987 351 aa26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 ETNPPLQ8TBG4 499 aa26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 FAM20AQ96MK3 541 aa26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 MRPL42Q9Y6G3 142 aaKnown RBP26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 WDR81Q562E7 1941 aa26.7■■□□□ 1.86
CDKN2A-214ENST00000579755 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP26.69■■□□□ 1.86
CDKN2A-214ENST00000579755 DDX11L8A8MPP1 907 aa26.69■■□□□ 1.86
CDKN2A-214ENST00000579755 DTNBO60941 627 aa26.69■■□□□ 1.86
CDKN2A-214ENST00000579755 TCEAL5Q5H9L2 206 aa26.69■■□□□ 1.86
CDKN2A-214ENST00000579755 FAM228AQ86W67 206 aa26.69■■□□□ 1.86
CDKN2A-214ENST00000579755 CRIPAKQ8N1N5 446 aa26.69■■□□□ 1.86
CDKN2A-214ENST00000579755 GJB4Q9NTQ9 266 aa26.69■■□□□ 1.86
CDKN2A-214ENST00000579755 GRM6O15303 877 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 SLC37A4O43826 429 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 MGEA5O60502 916 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 DKC1O60832 514 aaKnown RBP eCLIP26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 CTDNEP1O95476 244 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 EIF4BP23588 611 aaKnown RBP26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 KRT2P35908 639 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 PSMC5P62195 406 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 ME3Q16798 604 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 NAALADL2Q58DX5 795 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 PPP4R3AQ6IN85 833 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 NLRP7Q8WX94 980 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 NIFKQ9BYG3 293 aaKnown RBP26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 ATP6V0A4Q9HBG4 840 aa26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 SH2B1Q9NRF2 756 aaPredicted RBP26.68■■□□□ 1.86
CDKN2A-214ENST00000579755 CSPG5O95196 566 aa26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 BAG4O95429 457 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 CDC42EP1Q00587 391 aa26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 TRIM29Q14134 588 aa26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 OXER1Q8TDS5 423 aa26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 P2RX5Q93086 422 aa26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 ZNF668Q96K58 619 aaPredicted RBP26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 ALG13Q9NP73 1137 aaKnown RBP26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 AAASQ9NRG9 546 aa26.67■■□□□ 1.86
CDKN2A-214ENST00000579755 TBKBP1A7MCY6 615 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 C9IYK1 514 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 NCK2O43639 380 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 LINC00271P0C7V0 271 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 GATMP50440 423 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 LEXMQ3ZCV2 418 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 B3GNT9Q6UX72 402 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 LINC01465Q8N7H1 131 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 GTF3C6Q969F1 213 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 ADAMTS10Q9H324 1103 aa26.66■■□□□ 1.86
CDKN2A-214ENST00000579755 PLAGL2Q9UPG8 496 aa26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms