RNA–Protein interactions for RNA: ENST00000577840.5

CUEDC1-207, Transcript of CUE domain containing 1, humanhuman

TSL 5 BASIC

Gene CUEDC1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-207ENST00000577840 PGK1P00558 417 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 GAP43P17677 238 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 BEX3Q00994 111 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 PSMD2Q13200 908 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 ARSHQ5FYA8 562 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 ZNF484Q5JVG2 852 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 ISM2Q6H9L7 571 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 PCSK9Q8NBP7 692 aaKnown RBP17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 SLC17A8Q8NDX2 589 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 DNAJC19Q96DA6 116 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 DRC1Q96MC2 740 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 SH2D3AQ9BRG2 576 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 REEP2Q9BRK0 252 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 ARID2Q68CP9 1835 aa17.11■□□□□ 0.33
CUEDC1-207ENST00000577840 NPHP3-ACAD11A0A0J9YXS1 232 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 KLRC4O43908 158 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 RHOBTB3O94955 611 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 NKX3-2P78367 333 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 TBC1D8BQ0IIM8 1120 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 MORC3Q14149 939 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 MFSD10Q14728 455 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 HERC4Q5GLZ8 1057 aaPredicted RBP17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 ARMC5Q96C12 935 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 COL1A2P08123 1366 aa17.1■□□□□ 0.33
CUEDC1-207ENST00000577840 GAS2O43903 313 aaKnown RBP17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 HIP1RO75146 1068 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 ADAMTS4O75173 837 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 CAVIN2O95810 425 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 F2P00734 622 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 CST5P28325 142 aaPredicted RBP17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 PPP1R2P41236 205 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 PSEN2P49810 448 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 CHMP4BP1P59074 171 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 COASYQ13057 564 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 STIM1Q13586 685 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 EMC2Q15006 297 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 TARBP2Q15633 366 aaKnown RBP17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 ZNF658Q5TYW1 1059 aaPredicted RBP17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 MAEAQ7L5Y9 396 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 MYCT1Q8N699 235 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 MLKLQ8NB16 471 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 MTG1Q9BT17 334 aaPredicted RBP17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 FUCA2Q9BTY2 467 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 RNPEPQ9H4A4 650 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 PARVGQ9HBI0 331 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 LARSQ9P2J5 1176 aaKnown RBP17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 SEL1LQ9UBV2 794 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 KCNG1Q9UIX4 513 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 KAT6AQ92794 2004 aa17.09■□□□□ 0.33
CUEDC1-207ENST00000577840 MYH11P35749 1972 aa17.08■□□□□ 0.33
CUEDC1-207ENST00000577840 FRMD3A2A2Y4 597 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 MYADML2A6NDP7 307 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 RRN3P2A6NIE6 340 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 MAGEB2O15479 319 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 KIF20AO95235 890 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 INSRRP14616 1297 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 PURAQ00577 322 aaKnown RBP17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 PPFIA1Q13136 1202 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 KIAA0753Q2KHM9 967 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 FAM26FQ5R3K3 315 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 RETREG2Q8NC44 543 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 TCP11Q8WWU5 503 aa17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.32
CUEDC1-207ENST00000577840 COL6A3P12111 3177 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 MAFO75444 373 aaPredicted RBP17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 DNM2P50570 870 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 IGBP1P78318 339 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 ANO6Q4KMQ2 910 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 CHRDL2Q6WN34 429 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 STXBP4Q6ZWJ1 553 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 KLHDC9Q8NEP7 349 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 IFT74Q96LB3 600 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 RNF208Q9H0X6 261 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 UNC93B1Q9H1C4 597 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 C17orf75Q9HAS0 396 aa17.07■□□□□ 0.32
CUEDC1-207ENST00000577840 CEP290O15078 2479 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 NRCAMQ92823 1304 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 RSPH10B2B2RC85 870 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 CABYRO75952 493 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 ASGR1P07306 291 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 RSPH10BP0C881 870 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 GNAT1P11488 350 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 PLS3P13797 630 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 TMOD1P28289 359 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 ZNF131P52739 623 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 IRX5P78411 483 aaPredicted RBP17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 LRRC41Q15345 812 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 GRIK4Q16099 956 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 KCNA10Q16322 511 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 DPCR1Q3MIW9 517 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 CT47A1Q5JQC4 288 aaPredicted RBP17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 ODR4Q5SWX8 454 aa17.06■□□□□ 0.32
CUEDC1-207ENST00000577840 IER5Q5VY09 327 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms