RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 E2F5Q15329 346 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 CERS5Q8N5B7 392 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 HOOK2Q96ED9 719 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 TMX4Q9H1E5 349 aaPredicted RBP16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 TAS2R14Q9NYV8 317 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 DDX3XO00571 662 aaKnown RBP eCLIP16.01■□□□□ 0.154e-7■■□□□ 14.2
CUEDC1-206ENST00000577830 EXOC3O60645 756 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 SHMT1P34896 483 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 ICA1Q05084 483 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 MESDQ14696 234 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 GPATCH4Q5T3I0 446 aaKnown RBP16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 CDC42EP5Q6NZY7 148 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 SLC35G2Q8TBE7 412 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 A0A1B0GUL6 1792 aa16.01■□□□□ 0.15
CUEDC1-206ENST00000577830 VPS41P49754 854 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 QPCTQ16769 361 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 ACP6Q9NPH0 428 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 PNMA2Q9UL42 364 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 PPP1R9AQ9ULJ8 1098 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 EML1O00423 815 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 ITIH3Q06033 890 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 ZNF844Q08AG5 666 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 KDM7AQ6ZMT4 941 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 OTUD6AQ7L8S5 288 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 FBXO11Q86XK2 927 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 TBC1D22AQ8WUA7 517 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 UAP1Q16222 522 aaPredicted RBP16■□□□□ 0.15
CUEDC1-206ENST00000577830 ARFGAP2Q8N6H7 521 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 LMBR1Q8WVP7 490 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 CYFIP2Q96F07 1278 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 P2RX7Q99572 595 aaKnown RBP16■□□□□ 0.15
CUEDC1-206ENST00000577830 EDEM3Q9BZQ6 932 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 ISCUQ9H1K1 167 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 AIPL1Q9NZN9 384 aa16■□□□□ 0.15
CUEDC1-206ENST00000577830 HMGB1P1B2RPK0 211 aaPredicted RBP15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 VIMP08670 466 aaKnown RBP15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 SLC12A3P55017 1021 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 SEMA3FQ13275 785 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 ODR4Q5SWX8 454 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 DYDC2Q96IM9 177 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 LOC102724159A0A0B4J2E5 919 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 TISP43B9A030 160 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 CTNND1O60716 968 aaKnown RBP15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 GCFC2P16383 781 aaKnown RBP15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 PWP2Q15269 919 aaKnown RBP15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 NSMFQ6X4W1 530 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 PALB2Q86YC2 1186 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 CERKQ8TCT0 537 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 CNOT8Q9UFF9 292 aaKnown RBP15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 HS2ST1Q7LGA3 356 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 FAM178BQ8IXR5 827 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 ARHGEF26Q96DR7 871 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 PBKQ96KB5 322 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 EIF2AK1Q9BQI3 630 aaKnown RBP15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 PLCD4Q9BRC7 762 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 THAP2Q9H0W7 228 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 SCAF8Q9UPN6 1271 aaKnown RBP15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
CUEDC1-206ENST00000577830 ROBO3Q96MS0 1386 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 F5H6K3 240 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 GJC1P36383 396 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 KLRC3Q07444 240 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 ITGB3BPQ13352 177 aaPredicted RBP15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 MCTP2Q6DN12 878 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 DYDC1Q8WWB3 177 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 TEKT1Q969V4 418 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 BTBD6Q96KE9 485 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 FMO2Q99518 471 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 TMBIM4Q9HC24 238 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 GOLGA8IPA6NC78 632 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 GMNCA6NCL1 334 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 DDTLA6NHG4 134 aaPredicted RBP15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 GOLGA8JA6NMD2 632 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 KCNJ1P48048 391 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 SKOR1P84550 965 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 SNX1Q13596 522 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 TRIP13Q15645 432 aaPredicted RBP15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 RUFY4Q6ZNE9 571 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 SLFN12Q8IYM2 578 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 AMNQ9BXJ7 453 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 FRMD4BQ9Y2L6 1034 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 PCDHA2Q9Y5H9 948 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 IGSF9BQ9UPX0 1349 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 APBA3O96018 575 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 SHBGP04278 402 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 DR1Q01658 176 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 ZFYVE27Q5T4F4 411 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 SLC35C1Q96A29 364 aa15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.98■□□□□ 0.15
CUEDC1-206ENST00000577830 FRMD3A2A2Y4 597 aa15.97■□□□□ 0.15
CUEDC1-206ENST00000577830 MSH4O15457 936 aa15.97■□□□□ 0.15
CUEDC1-206ENST00000577830 FGFR4P22455 802 aa15.97■□□□□ 0.15
CUEDC1-206ENST00000577830 HOXD13P35453 343 aa15.97■□□□□ 0.15
CUEDC1-206ENST00000577830 LRRC14Q15048 493 aa15.97■□□□□ 0.15
CUEDC1-206ENST00000577830 KCNV1Q6PIU1 500 aa15.97■□□□□ 0.15
CUEDC1-206ENST00000577830 BANK1Q8NDB2 785 aa15.97■□□□□ 0.15
CUEDC1-206ENST00000577830 UBE2TQ9NPD8 197 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms