RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 PALM3A6NDB9 673 aaPredicted RBP16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 MFAP1P55081 439 aaKnown RBP16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 PLCB4Q15147 1175 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 SLC35G1Q2M3R5 365 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 LRRC43Q8N309 656 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 TMEM87AQ8NBN3 555 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 SMARCC2Q8TAQ2 1214 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 AZI2Q9H6S1 392 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 RIOX1Q9H6W3 641 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 KCNK12Q9HB15 430 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 ST3GAL5Q9UNP4 418 aa16.2■□□□□ 0.18
PPP4R1-206ENST00000577779 GPR182O15218 404 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 HOXA2O43364 376 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 CXCL14O95715 111 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 SDHBP21912 280 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 FAM189BP81408 668 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 USP17L6PQ6QN14 398 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 MTHFD1LQ6UB35 978 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 TMC5Q6UXY8 1006 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 CCDC149Q6ZUS6 474 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 ABI1Q8IZP0 508 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 CUL5Q93034 780 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 CASD1Q96PB1 797 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 PCYT2Q99447 389 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 ELAC1Q9H777 363 aaKnown RBP16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 CDHR5Q9HBB8 845 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 FAM208BQ5VWN6 2430 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 SALL3Q9BXA9 1300 aa16.19■□□□□ 0.18
PPP4R1-206ENST00000577779 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 NARSO43776 548 aaKnown RBP16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 CFHP08603 1231 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 SP9P0CG40 484 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 EPCAMP16422 314 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 TBC1D8BQ0IIM8 1120 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 TICAM2Q86XR7 235 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 TMEM40Q8WWA1 233 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 KRT23Q9C075 422 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 WNT16Q9UBV4 365 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 CACNA1IQ9P0X4 2223 aa16.18■□□□□ 0.18
PPP4R1-206ENST00000577779 KRBA1A5PL33 1030 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 ITGB5P18084 799 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 MTMR1Q13613 665 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 KIAA0319Q5VV43 1072 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 CABP7Q86V35 215 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 SLC39A11Q8N1S5 342 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 PIBF1Q8WXW3 757 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 TBC1D17Q9HA65 648 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 IGSF9Q9P2J2 1179 aa16.17■□□□□ 0.18
PPP4R1-206ENST00000577779 SPDYE4A6NLX3 237 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 CYTH3O43739 400 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 ATXN1P54253 815 aaKnown RBP16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 GRM4Q14833 912 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 GPR149Q86SP6 731 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 SUMF1Q8NBK3 374 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 FEZF2Q8TBJ5 459 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 JPH1Q9HDC5 661 aaPredicted RBP16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 RNF19AQ9NV58 838 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 CA14Q9ULX7 337 aa16.16■□□□□ 0.18
PPP4R1-206ENST00000577779 FRYQ5TBA9 3013 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 MEIS2O14770 477 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 KINO60870 393 aaKnown RBP16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 DCNP07585 359 aaKnown RBP16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 KLRC1P26715 233 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 SEC23AQ15436 765 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 PLPPR4Q7Z2D5 763 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 FAM228AQ86W67 206 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 C1orf210Q8IVY1 113 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 KIAA0319LQ8IZA0 1049 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 VPS52Q8N1B4 723 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 SLC22A17Q8WUG5 538 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 AUTS2Q8WXX7 1259 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 TMEM169Q96HH4 297 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 PPP1R16BQ96T49 567 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 SFXN1Q9H9B4 322 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 NCDNQ9UBB6 729 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 SLC9A2Q9UBY0 812 aa16.15■□□□□ 0.18
PPP4R1-206ENST00000577779 EVPLQ92817 2033 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 NT5C1B-RDH14C9J2C7 533 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 PIK3CDO00329 1044 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 ALDH7A1P49419 539 aaKnown RBP16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 METAP2P50579 478 aaKnown RBP eCLIP16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 STAT5BP51692 787 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 PDE1AP54750 535 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 DSC3Q14574 896 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 NONOQ15233 471 aaKnown RBP eCLIP16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 IMMTQ16891 758 aaKnown RBP16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 KIZQ2M2Z5 673 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 RNF169Q8NCN4 708 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 OSMRQ99650 979 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 ZBP1Q9H171 429 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 CDV3Q9UKY7 258 aaKnown RBP16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 SIT1Q9Y3P8 196 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 ZZEF1O43149 2961 aa16.14■□□□□ 0.17
PPP4R1-206ENST00000577779 C2orf16Q68DN1 1984 aa16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 CRYBB1P53674 252 aaPredicted RBP16.13■□□□□ 0.17
PPP4R1-206ENST00000577779 GIT2Q14161 759 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms