RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 VPS37CA5D8V6 355 aaPredicted RBP21.62■■□□□ 1.05
SS18-208ENST00000577751 VTNP04004 478 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 CRYBB1P53674 252 aaPredicted RBP21.62■■□□□ 1.05
SS18-208ENST00000577751 PDIA5Q14554 519 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 RAB30Q15771 203 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.62■■□□□ 1.05
SS18-208ENST00000577751 CATSPER3Q86XQ3 398 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 HERC6Q8IVU3 1022 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 IGSF22Q8N9C0 903 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 CEP170P1Q96L14 293 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 MAP7D2Q96T17 732 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 POLR3CQ9BUI4 534 aaPredicted RBP21.62■■□□□ 1.05
SS18-208ENST00000577751 DHX33Q9H6R0 707 aaKnown RBP21.62■■□□□ 1.05
SS18-208ENST00000577751 TUFT1Q9NNX1 390 aa21.62■■□□□ 1.05
SS18-208ENST00000577751 XRCC6P12956 609 aaKnown RBP eCLIP21.61■■□□□ 1.05
SS18-208ENST00000577751 RPA1P27694 616 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 RABGGTBP53611 331 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 ATP2C1P98194 919 aaPredicted RBP21.61■■□□□ 1.05
SS18-208ENST00000577751 DRP2Q13474 957 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 IL17AQ16552 155 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 KIZQ2M2Z5 673 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 TMEM266Q2M3C6 531 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 TMEM40Q8WWA1 233 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 JPH2Q9BR39 696 aaPredicted RBP21.61■■□□□ 1.05
SS18-208ENST00000577751 ADAMTS10Q9H324 1103 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 ANKEF1Q9NU02 776 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 AKT3Q9Y243 479 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 PCDHA11Q9Y5I1 949 aa21.61■■□□□ 1.05
SS18-208ENST00000577751 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.6■■□□□ 1.05
SS18-208ENST00000577751 MED24O75448 989 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 CD52P31358 61 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 NLRP11P59045 1033 aaKnown RBP21.6■■□□□ 1.05
SS18-208ENST00000577751 Q7L0L9 218 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 FERMT3Q86UX7 667 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 EXOC8Q8IYI6 725 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 DEFB123Q8N688 67 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 TIFAQ96CG3 184 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 TTYH1Q9H313 450 aaPredicted RBP21.6■■□□□ 1.05
SS18-208ENST00000577751 MSRAQ9UJ68 235 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 PADI3Q9ULW8 664 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 MTMR6Q9Y217 621 aa21.6■■□□□ 1.05
SS18-208ENST00000577751 YBX2Q9Y2T7 364 aaKnown RBP21.6■■□□□ 1.05
SS18-208ENST00000577751 RFC5P40937 340 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 GPC3P51654 580 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 XKR9Q5GH70 373 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 ZNF697Q5TEC3 545 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 FAM43BQ6ZT52 329 aaPredicted RBP21.59■■□□□ 1.05
SS18-208ENST00000577751 ERMNQ8TAM6 284 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 SLC7A3Q8WY07 619 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 OSMRQ99650 979 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 SEMA6BQ9H3T3 888 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 LRWD1Q9UFC0 647 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 GINS2Q9Y248 185 aa21.59■■□□□ 1.05
SS18-208ENST00000577751 NOC2LQ9Y3T9 749 aaKnown RBP21.59■■□□□ 1.05
SS18-208ENST00000577751 GJB5O95377 273 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 SLC34A2O95436 690 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 AMHP03971 560 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 MYOGP15173 224 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 MUTP22033 750 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 RARRES1P49788 294 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 DNM2P50570 870 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 CDC42EP1Q00587 391 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 RESTQ13127 1097 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 PAK2Q13177 524 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 ARL6IP4Q66PJ3 421 aaKnown RBP21.58■■□□□ 1.05
SS18-208ENST00000577751 DTHD1Q6ZMT9 781 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 TMCO2Q7Z6W1 182 aaPredicted RBP21.58■■□□□ 1.05
SS18-208ENST00000577751 PPP1R16BQ96T49 567 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 FTHL17Q9BXU8 183 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 RAB34Q9BZG1 259 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 ERVK-5Q9HDB9 667 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 MTMR10Q9NXD2 777 aa21.58■■□□□ 1.05
SS18-208ENST00000577751 ENPP3O14638 875 aa21.57■■□□□ 1.04
SS18-208ENST00000577751 STX6O43752 255 aa21.57■■□□□ 1.04
SS18-208ENST00000577751 GAS2O43903 313 aaKnown RBP21.57■■□□□ 1.04
SS18-208ENST00000577751 RPS6KA5O75582 802 aa21.57■■□□□ 1.04
SS18-208ENST00000577751 POLGP54098 1239 aaPredicted RBP21.57■■□□□ 1.04
SS18-208ENST00000577751 HAUS3Q68CZ6 603 aa21.57■■□□□ 1.04
SS18-208ENST00000577751 RTN4RL1Q86UN2 441 aaPredicted RBP21.57■■□□□ 1.04
SS18-208ENST00000577751 PIGOQ8TEQ8 1089 aa21.57■■□□□ 1.04
SS18-208ENST00000577751 TOP1MTQ969P6 601 aa21.57■■□□□ 1.04
SS18-208ENST00000577751 NACC1Q96RE7 527 aa21.57■■□□□ 1.04
SS18-208ENST00000577751 SUCLA2Q9P2R7 463 aaPredicted RBP21.57■■□□□ 1.04
SS18-208ENST00000577751 STK24Q9Y6E0 443 aa21.57■■□□□ 1.04
SS18-208ENST00000577751 A0A087WWV3 80 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 GPR182O15218 404 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 EIF4BP23588 611 aaKnown RBP21.56■■□□□ 1.04
SS18-208ENST00000577751 ECM1Q16610 540 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 ODR4Q5SWX8 454 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 FAM228AQ86W67 206 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 MYOCDQ8IZQ8 938 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 LINC01599Q8WXQ3 324 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 NKX2-4Q9H2Z4 354 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 TMX1Q9H3N1 280 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 ZNF576Q9H609 170 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 DBR1Q9UK59 544 aaKnown RBP21.56■■□□□ 1.04
SS18-208ENST00000577751 ST3GAL5Q9UNP4 418 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 TTC3P53804 2025 aa21.56■■□□□ 1.04
SS18-208ENST00000577751 CDH23Q9H251 3354 aa21.55■■□□□ 1.04
SS18-208ENST00000577751 DGAT1O75907 488 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms