RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 GJD3Q8N144 294 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 FSIP1Q8NA03 581 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ATP6V0A1Q93050 837 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DYDC2Q96IM9 177 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 MAGEF1Q9HAY2 307 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SPC25Q9HBM1 224 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ZNF302Q9NR11 478 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ANKEF1Q9NU02 776 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KBTBD4Q9NVX7 518 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 RGL1Q9NZL6 768 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 WRAP73Q9P2S5 460 aaPredicted RBP12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DBR1Q9UK59 544 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 TBX21Q9UL17 535 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 WDR81Q562E7 1941 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 BRWD1Q9NSI6 2320 aa12.44□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SYNRGQ9UMZ2 1314 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DOCK5Q9H7D0 1870 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 POTEB3A0JP26 581 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 POLR2DO15514 142 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CHMP2AO43633 222 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 NR1I2O75469 434 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 EYA4O95677 639 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 F2P00734 622 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 LIG1P18858 919 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CCT6AP40227 531 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SYKP43405 635 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KARSQ15046 597 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 FSCN1Q16658 493 aaKnown RBP12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SKOR2Q2VWA4 1001 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 XKR3Q5GH77 459 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KANK3Q6NY19 840 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 POTEBQ6S5H4 581 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 TPH2Q8IWU9 490 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SYT2Q8N9I0 419 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 GPT2Q8TD30 523 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 LRRC15Q8TF66 581 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CEP89Q96ST8 783 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 LXNQ9BS40 222 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 XPNPEP3Q9NQH7 507 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 BLOC1S4Q9NUP1 217 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ERAP1Q9NZ08 941 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 GABBR1Q9UBS5 961 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KIAA1024Q9UPX6 916 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DNM3Q9UQ16 869 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SAMM50Q9Y512 469 aa12.43□□□□□ -0.42
CDK5RAP3-204ENST00000577664 H3BRB1 525 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ACTN4O43707 911 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 GTPBP6O43824 516 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ZEB2O60315 1214 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 LGALS2P05162 132 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 MYL1P05976 194 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PLCG1P19174 1290 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PTGS1P23219 599 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PURAQ00577 322 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CTTNQ14247 550 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 TARBP2Q15633 366 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 UGCGQ16739 394 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KLHL40Q2TBA0 621 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 LONRF3Q496Y0 759 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 RRAGBQ5VZM2 374 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PDXDC2PQ6P474 469 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ZNF365Q70YC5 407 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ANO5Q75V66 913 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 OTUD6AQ7L8S5 288 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 RNF180Q86T96 592 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PCSK9Q8NBP7 692 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 BBXQ8WY36 941 aaPredicted RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KAT2BQ92831 832 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 FAM167AQ96KS9 214 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SEZ6LQ9BYH1 1024 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 TUT1Q9H6E5 874 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 AZI2Q9H6S1 392 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 NRBP2Q9NSY0 501 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DDX19AQ9NUU7 478 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KCND2Q9NZV8 630 aa12.42□□□□□ -0.42
CDK5RAP3-204ENST00000577664 MOXD2PA6NHM9 499 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DCDC2CA8MYV0 355 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 HBP1O60381 514 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PQBP1O60828 265 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CABYRO75952 493 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 HOXC8P31273 242 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 YWHABP31946 246 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SLC12A3P55017 1021 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PSMC6P62333 389 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 GNASQ5JWF2 1037 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 PPP2R2DQ66LE6 453 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KRBA2Q6ZNG9 492 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KCNK18Q7Z418 384 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 BANK1Q8NDB2 785 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 SPATA20Q8TB22 786 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 ATP8B4Q8TF62 1192 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 RAD54LQ92698 747 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 MTRQ99707 1265 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 KATNAL1Q9BW62 490 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 TNMDQ9H2S6 317 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 DACT1Q9NYF0 836 aa12.41□□□□□ -0.42
CDK5RAP3-204ENST00000577664 MYH9P35579 1960 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-204ENST00000577664 A0A1W2PQ45 241 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-204ENST00000577664 A0A1W2PQY0 241 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms