RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-223ENST00000576932 NOP56O00567 594 aaKnown RBP10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 CSPG5O95196 566 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 CFBP00751 764 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 STAG3L1P0CL83 205 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 HOXB8P17481 243 aaPredicted RBP10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 PGM5Q15124 567 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 QRICH1Q2TAL8 776 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 ASPRV1Q53RT3 343 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 CCDC178Q5BJE1 867 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 FBXO47Q5MNV8 452 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 METTL7BQ6UX53 244 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 TSHZ1Q6ZSZ6 1077 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 FRMD5Q7Z6J6 570 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 RBM23Q86U06 439 aaKnown RBP10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 KREMEN2Q8NCW0 462 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 LMBR1Q8WVP7 490 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 ARID3AQ99856 593 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 UBA5Q9GZZ9 404 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 S1PR5Q9H228 398 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 SEMA4AQ9H3S1 761 aa10.7□□□□□ -0.7
TOM1L1-223ENST00000576932 TPRP12270 2363 aaKnown RBP10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 OPLAHO14841 1288 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 ATP9BO43861 1147 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 STAM2O75886 525 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 GOLGA8HP0CJ92 632 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 MYCLP12524 364 aaPredicted RBP10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 SKIP12755 728 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 CCND2P30279 289 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 PRR20EP86478 221 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 PRR20CP86479 221 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 PRR20DP86480 221 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 PRR20BP86481 221 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 PRR20AP86496 221 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 ARHGAP4P98171 946 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 KCNC3Q14003 757 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 NEDD9Q14511 834 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 GNPTABQ3T906 1256 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 RRP12Q5JTH9 1297 aaKnown RBP10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 TSHZ3Q63HK5 1081 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 ANKRD54Q6NXT1 300 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 PI4K2BQ8TCG2 481 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 AMNQ9BXJ7 453 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 PGPEP1Q9NXJ5 209 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 DOLKQ9UPQ8 538 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 NCOR2Q9Y618 2525 aa10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 KMT2BQ9UMN6 2715 aaPredicted RBP10.69□□□□□ -0.7
TOM1L1-223ENST00000576932 KAT6AQ92794 2004 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 MYH6P13533 1939 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 BRD1O95696 1058 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 FGAP02671 866 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 FSHRP23945 695 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 TRAF1Q13077 416 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 EML3Q32P44 896 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 VPS53Q5VIR6 699 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 DGLUCYQ7Z3D6 616 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 TICAM2Q86XR7 235 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 VN1R2Q8NFZ6 395 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 MICAL1Q8TDZ2 1067 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 LINC01599Q8WXQ3 324 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 ESR2Q92731 530 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 NECTIN4Q96NY8 510 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 INPP4AQ96PE3 977 aaPredicted RBP10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 GPR20Q99678 358 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 CPVLQ9H3G5 476 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 RNF41Q9H4P4 317 aaPredicted RBP10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 DCTPP1Q9H773 170 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 AAASQ9NRG9 546 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 HELLSQ9NRZ9 838 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 LZTS1Q9Y250 596 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 PCDHB12Q9Y5F1 795 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 PLXNA4Q9HCM2 1894 aa10.68□□□□□ -0.7
TOM1L1-223ENST00000576932 MED19A0JLT2 244 aaPredicted RBP10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 MBLAC1A4D2B0 266 aaPredicted RBP10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 ESPNB1AK53 854 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 FSCN2O14926 492 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 SIAH2O43255 324 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 SORBS3O60504 671 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 PUM1Q14671 1186 aaKnown RBP eCLIP10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 SYCE2Q6PIF2 218 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 MFSD6Q6ZSS7 791 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 RMDN1Q96DB5 314 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 SENP7Q9BQF6 1050 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 JMJD4Q9H9V9 463 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 PCDHGC5Q9Y5F6 944 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 MYO10Q9HD67 2058 aa10.67□□□□□ -0.7
TOM1L1-223ENST00000576932 FRMPD4Q14CM0 1322 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 SPATA31C2B4DYI2 1134 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 PER2O15055 1255 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 FIBPO43427 364 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 SCG2P13521 617 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 TECP42680 631 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 ITIH3Q06033 890 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 USP4Q13107 963 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 IER5Q5VY09 327 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 RUFY4Q6ZNE9 571 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 RTN4RL1Q86UN2 441 aaPredicted RBP10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 IQCA1Q86XH1 822 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 TRIM50Q86XT4 487 aa10.66□□□□□ -0.7
TOM1L1-223ENST00000576932 CCDC116Q8IYX3 515 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms