RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 ARRDC4Q8NCT1 418 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 SPATA20Q8TB22 786 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 VTI1AQ96AJ9 217 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 DNAJC19Q96DA6 116 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 NAT10Q9H0A0 1025 aaKnown RBP18.28■□□□□ 0.52
ERCC4-208ENST00000576348 UNC93B1Q9H1C4 597 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 PARVGQ9HBI0 331 aa18.28■□□□□ 0.52
ERCC4-208ENST00000576348 ADAMTS4O75173 837 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 CCL5P13501 91 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 INSRRP14616 1297 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 NKX3-2P78367 333 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 PURAQ00577 322 aaKnown RBP18.27■□□□□ 0.52
ERCC4-208ENST00000576348 PSMD2Q13200 908 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 MORC3Q14149 939 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 L1TD1Q5T7N2 865 aaKnown RBP18.27■□□□□ 0.52
ERCC4-208ENST00000576348 RETREG2Q8NC44 543 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 KIFAP3Q92845 792 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 RNF208Q9H0X6 261 aa18.27■□□□□ 0.52
ERCC4-208ENST00000576348 COL1A2P08123 1366 aa18.27■□□□□ 0.51
ERCC4-208ENST00000576348 RRN3P2A6NIE6 340 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 KBTBD13C9JR72 458 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 MAGEB2O15479 319 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 GAS2O43903 313 aaKnown RBP18.26■□□□□ 0.51
ERCC4-208ENST00000576348 KLRC4O43908 158 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 RHOBTB3O94955 611 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 SMIM10L2AP0DMW4 78 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 SMIM10L2BP0DMW5 78 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 CST5P28325 142 aaPredicted RBP18.26■□□□□ 0.51
ERCC4-208ENST00000576348 DNM2P50570 870 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 TARBP2Q15633 366 aaKnown RBP18.26■□□□□ 0.51
ERCC4-208ENST00000576348 GRIK4Q16099 956 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 KCNA10Q16322 511 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 FAM26FQ5R3K3 315 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 ZNF658Q5TYW1 1059 aaPredicted RBP18.26■□□□□ 0.51
ERCC4-208ENST00000576348 CXCL17Q6UXB2 119 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 SFR1Q86XK3 245 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 C7orf31Q8N865 590 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 IFT74Q96LB3 600 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 SUGCTQ9HAC7 445 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 POLD4Q9HCU8 107 aa18.26■□□□□ 0.51
ERCC4-208ENST00000576348 LARSQ9P2J5 1176 aaKnown RBP18.26■□□□□ 0.51
ERCC4-208ENST00000576348 RSPH10B2B2RC85 870 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 MAFO75444 373 aaPredicted RBP18.25■□□□□ 0.51
ERCC4-208ENST00000576348 CABYRO75952 493 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 RSPH10BP0C881 870 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 GNAT1P11488 350 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 LRRC41Q15345 812 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 ANO6Q4KMQ2 910 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 ODR4Q5SWX8 454 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 STXBP4Q6ZWJ1 553 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 METTL13Q8N6R0 699 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 MLKLQ8NB16 471 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 KLHDC9Q8NEP7 349 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 TRAPPC12Q8WVT3 735 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 TCP11Q8WWU5 503 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 KAT2BQ92831 832 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 DEFB118Q96PH6 123 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 POLR3FQ9H1D9 316 aaPredicted RBP18.25■□□□□ 0.51
ERCC4-208ENST00000576348 DNAJC25Q9H1X3 360 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 MRPL44Q9H9J2 332 aaKnown RBP18.25■□□□□ 0.51
ERCC4-208ENST00000576348 TBC1D7Q9P0N9 293 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 SEL1LQ9UBV2 794 aa18.25■□□□□ 0.51
ERCC4-208ENST00000576348 DOCK5Q9H7D0 1870 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 SFI1A8K8P3 1242 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 KIF20AO95235 890 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 CAVIN2O95810 425 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 ASGR1P07306 291 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 TMOD1P28289 359 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 SMTNP53814 917 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 DMP1Q13316 513 aaPredicted RBP18.24■□□□□ 0.51
ERCC4-208ENST00000576348 DPCR1Q3MIW9 517 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 FAM47CQ5HY64 1035 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 FAM178BQ8IXR5 827 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 TMEM143Q96AN5 459 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 DHX33Q9H6R0 707 aaKnown RBP18.24■□□□□ 0.51
ERCC4-208ENST00000576348 SLC39A2Q9NP94 309 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 GPRC5CQ9NQ84 441 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 SETD4Q9NVD3 440 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 KCNG1Q9UIX4 513 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 GDAQ9Y2T3 454 aa18.24■□□□□ 0.51
ERCC4-208ENST00000576348 NRCAMQ92823 1304 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 FRMD3A2A2Y4 597 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 C17orf102A2RUQ5 167 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 CCDC169A6NNP5 214 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 PLS3P13797 630 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 KLRC1P26715 233 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 PPP1R2P41236 205 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 ZNF131P52739 623 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 ACLYP53396 1101 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 PPP2R5AQ15172 486 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 MTFR1Q15390 333 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 IER5Q5VY09 327 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 LHX8Q68G74 356 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 KLHL10Q6JEL2 608 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 SMYD4Q8IYR2 804 aaPredicted RBP18.23■□□□□ 0.51
ERCC4-208ENST00000576348 HPS3Q969F9 1004 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 GLT1D1Q96MS3 346 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 TSEN34Q9BSV6 310 aaKnown RBP18.23■□□□□ 0.51
ERCC4-208ENST00000576348 FUCA2Q9BTY2 467 aa18.23■□□□□ 0.51
ERCC4-208ENST00000576348 MOXD2PA6NHM9 499 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms